RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 TSC22D3Q99576 134 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 TEX13AQ9BXU3 409 aaPredicted RBP10.38□□□□□ -0.75
RPGR-202ENST00000339363 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 SH3TC1Q8TE82 1336 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 SLIT1O75093 1534 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 MEGF6O75095 1541 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 WNT7AO00755 349 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 RANBP6O60518 1105 aaKnown RBP10.38□□□□□ -0.75
RPGR-202ENST00000339363 NNTQ13423 1086 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
RPGR-202ENST00000339363 PRC1O43663 620 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 USP14P54578 494 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 CCDC122Q5T0U0 273 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 FAM210AQ96ND0 272 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 VCPKMTQ9H867 229 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 ZAP70P43403 619 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 PTPAQ15257 358 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 MB21D2Q8IYB1 491 aaPredicted RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 TC2NQ8N9U0 490 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 PSMB7Q99436 277 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 TPX2Q9ULW0 747 aaKnown RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 TFR2Q9UP52 801 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 MRPL12P52815 198 aaKnown RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 NAA35Q5VZE5 725 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 ZNF473Q8WTR7 871 aaKnown RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 SAMSN1Q9NSI8 373 aaKnown RBP10.37□□□□□ -0.75
RPGR-202ENST00000339363 PCDHA5Q9Y5H7 936 aa10.37□□□□□ -0.75
RPGR-202ENST00000339363 MYO5AQ9Y4I1 1855 aaKnown RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 BACH1O14867 736 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 TEX33O43247 280 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 MXRA7P84157 204 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 ANO1Q5XXA6 986 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 ACTR5Q9H9F9 607 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 BSDC1Q9NW68 430 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 NLRP2Q9NX02 1062 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 N4BP3O15049 544 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 PRPF6O94906 941 aaKnown RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 CSB-PGBD3P0DP91 1061 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 PHKG2P15735 406 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 CCT6AP40227 531 aaKnown RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 HDLBPQ00341 1268 aaKnown RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 RBL2Q08999 1139 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 IFFO1Q0D2I5 559 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 LRRC23Q53EV4 343 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 SMYD4Q8IYR2 804 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 BPIFA3Q9BQP9 254 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 ATP6V0A4Q9HBG4 840 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 DDX58O95786 925 aaKnown RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 PECAM1P16284 738 aaPredicted RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 C2orf54Q08AI8 447 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 LAMB3Q13751 1172 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 RAD9BQ6WBX8 426 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 CACNA2D3Q8IZS8 1091 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 C3orf20Q8ND61 904 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 CCDC47Q96A33 483 aaKnown RBP10.36□□□□□ -0.75
RPGR-202ENST00000339363 CCT8L2Q96SF2 557 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.36□□□□□ -0.75
RPGR-202ENST00000339363 BATF3Q9NR55 127 aa10.36□□□□□ -0.75
RPGR-202ENST00000339363 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
RPGR-202ENST00000339363 ADAMTS3O15072 1205 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 IFIT1P09914 478 aaKnown RBP10.35□□□□□ -0.75
RPGR-202ENST00000339363 IDEP14735 1019 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 CASP14P31944 242 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 LSP1P33241 339 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 TOB1P50616 345 aaPredicted RBP10.35□□□□□ -0.75
RPGR-202ENST00000339363 RPS6KA3P51812 740 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 VAV2P52735 878 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 SLC7A5Q01650 507 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 HLTFQ14527 1009 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPGR-202ENST00000339363 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 C11orf91Q3C1V1 193 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 NLRP14Q86W24 1093 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 KCNJ14Q9UNX9 436 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 ARHGAP23Q9P227 1491 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 A0A087X0B3 334 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 hCG_1642624A0A1W2PR95 340 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 MACROD2A1Z1Q3 448 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 RNF113AO15541 343 aaKnown RBP10.35□□□□□ -0.75
RPGR-202ENST00000339363 YEATS4O95619 227 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 CDC25AP30304 524 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 AARSP49588 968 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPGR-202ENST00000339363 TRIM74Q86UV6 250 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 TRIM73Q86UV7 250 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 CNGA4Q8IV77 575 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 ARL8AQ96BM9 186 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 ZNF274Q96GC6 653 aaPredicted RBP10.35□□□□□ -0.75
RPGR-202ENST00000339363 DSCC1Q9BVC3 393 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 TRIM4Q9C037 500 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 FAM184BQ9ULE4 1060 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms