RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 LRRC2Q9BYS8 371 aa19.63■□□□□ 0.73
SFN-201ENST00000339276 CPA4Q9UI42 421 aa19.63■□□□□ 0.73
SFN-201ENST00000339276 SH2B2O14492 632 aaPredicted RBP19.62■□□□□ 0.73
SFN-201ENST00000339276 FLOT1O75955 427 aa19.62■□□□□ 0.73
SFN-201ENST00000339276 BMP3P12645 472 aa19.62■□□□□ 0.73
SFN-201ENST00000339276 EXOSC10Q01780 885 aaKnown RBP19.62■□□□□ 0.73
SFN-201ENST00000339276 DHX32Q7L7V1 743 aaKnown RBP19.62■□□□□ 0.73
SFN-201ENST00000339276 LY9Q9HBG7 655 aa19.62■□□□□ 0.73
SFN-201ENST00000339276 FBXO28Q9NVF7 368 aa19.62■□□□□ 0.73
SFN-201ENST00000339276 ISY1Q9ULR0 285 aaKnown RBP19.62■□□□□ 0.73
SFN-201ENST00000339276 A0A0G2JMZ2 1700 aa19.62■□□□□ 0.73
SFN-201ENST00000339276 WDR19Q8NEZ3 1342 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 SPDYE16A6NNV3 312 aaPredicted RBP19.61■□□□□ 0.73
SFN-201ENST00000339276 GPR25O00155 361 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 HMGB1P09429 215 aaKnown RBP19.61■□□□□ 0.73
SFN-201ENST00000339276 PDHBP11177 359 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 CASTP20810 708 aaKnown RBP19.61■□□□□ 0.73
SFN-201ENST00000339276 SLC1A4P43007 532 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 CTCFP49711 727 aaPredicted RBP19.61■□□□□ 0.73
SFN-201ENST00000339276 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 POTEEQ6S8J3 1075 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
SFN-201ENST00000339276 C17orf99Q6UX52 265 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 TMEM87BQ96K49 555 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 MTA3Q9BTC8 594 aa19.61■□□□□ 0.73
SFN-201ENST00000339276 FRMPD2Q68DX3 1309 aaPredicted RBP19.6■□□□□ 0.73
SFN-201ENST00000339276 PEX10O60683 326 aa19.6■□□□□ 0.73
SFN-201ENST00000339276 PSMA5P28066 241 aa19.6■□□□□ 0.73
SFN-201ENST00000339276 LBX1P52954 281 aa19.6■□□□□ 0.73
SFN-201ENST00000339276 COG2Q14746 738 aa19.6■□□□□ 0.73
SFN-201ENST00000339276 DCAF4Q8WV16 495 aa19.6■□□□□ 0.73
SFN-201ENST00000339276 SNHG28P0DPA3 235 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 BCRP11274 1271 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 RPS6KB1P23443 525 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 DSG3P32926 999 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 GCLCP48506 637 aaPredicted RBP19.59■□□□□ 0.73
SFN-201ENST00000339276 ANAPC15P60006 121 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 ANKRD13CQ8N6S4 541 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 ATG4CQ96DT6 458 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 TXNRD2Q9NNW7 524 aa19.59■□□□□ 0.73
SFN-201ENST00000339276 MYPNQ86TC9 1320 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 ZSWIM8A7E2V4 1837 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 TMEM232C9JQI7 657 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 NOM1Q5C9Z4 860 aaKnown RBP19.58■□□□□ 0.73
SFN-201ENST00000339276 LBX2Q6XYB7 198 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 ZNF296Q8WUU4 475 aaPredicted RBP19.58■□□□□ 0.73
SFN-201ENST00000339276 SLF1Q9BQI6 1058 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 PAGR1Q9BTK6 254 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 UPF3BQ9BZI7 483 aaKnown RBP19.58■□□□□ 0.73
SFN-201ENST00000339276 ZSWIM6Q9HCJ5 1215 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 HOXC10Q9NYD6 342 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 RBPJLQ9UBG7 517 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 PPP1R9AQ9ULJ8 1098 aa19.58■□□□□ 0.73
SFN-201ENST00000339276 COL11A1P12107 1806 aaPredicted RBP19.58■□□□□ 0.72
SFN-201ENST00000339276 CNMDO75829 334 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 GOLGA8HP0CJ92 632 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 LIFRP42702 1097 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 ZNF543Q08ER8 600 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 TTBK2Q6IQ55 1244 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 NFXL1Q6ZNB6 911 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 RUFY3Q7L099 469 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 GTF3C2Q8WUA4 911 aaPredicted RBP19.57■□□□□ 0.72
SFN-201ENST00000339276 KIFC2Q96AC6 838 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 TM6SF1Q9BZW5 370 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 GPCPD1Q9NPB8 672 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 FEM1BQ9UK73 627 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 CASP8AP2Q9UKL3 1982 aa19.57■□□□□ 0.72
SFN-201ENST00000339276 FKTNO75072 461 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 STAT2P52630 851 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 SP3Q02447 781 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 IKQ13123 557 aaPredicted RBP19.56■□□□□ 0.72
SFN-201ENST00000339276 FAM110CQ1W6H9 321 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 Q6ZUG5 572 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 ZNF654Q8IZM8 581 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 MYL10Q9BUA6 226 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 BTBD7Q9P203 1132 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 MORF4L1Q9UBU8 362 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
SFN-201ENST00000339276 CCDC69A6NI79 296 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 ECM2O94769 699 aaPredicted RBP19.55■□□□□ 0.72
SFN-201ENST00000339276 SLC16A2P36021 539 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 TROAPQ12815 778 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 CATIPQ7Z7H3 387 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 FAM160B2Q86V87 743 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 SGMS1Q86VZ5 419 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 TMTC2Q8N394 836 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 PRPF38AQ8NAV1 312 aaKnown RBP19.55■□□□□ 0.72
SFN-201ENST00000339276 IL17RAQ96F46 866 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 C22orf23Q9BZE7 217 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 ADAMTS5Q9UNA0 930 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 RABGAP1Q9Y3P9 1069 aa19.55■□□□□ 0.72
SFN-201ENST00000339276 VWA5AO00534 786 aa19.54■□□□□ 0.72
SFN-201ENST00000339276 PLA2G6O60733 806 aa19.54■□□□□ 0.72
SFN-201ENST00000339276 PARP1P09874 1014 aaKnown RBP19.54■□□□□ 0.72
SFN-201ENST00000339276 ERVK-9P63128 1117 aa19.54■□□□□ 0.72
SFN-201ENST00000339276 ERVK-24P63145 666 aa19.54■□□□□ 0.72
SFN-201ENST00000339276 FGD1P98174 961 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms