RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MYO3BQ8WXR4 1341 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 PSDA5PKW4 1024 aaPredicted RBP25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 SPDYE2BA6NHP3 402 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 SPDYE6P0CI01 402 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 LZTS2Q9BRK4 669 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 TRIM34Q9BYJ4 488 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 SIPA1L1O43166 1804 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 TRIM75PA6NK02 468 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 CTAGE5O15320 804 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 CUTAO60888 179 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 CERKLQ49MI3 558 aaPredicted RBP25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 SOGA3Q5TF21 947 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 OGFOD1Q8N543 542 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 SPZ1Q9BXG8 430 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 FBXO2Q9UK22 296 aaPredicted RBP25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 ZNF174Q15697 407 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 RESP18Q5W5W9 173 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 PIGSQ96S52 555 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 DNAJC25Q9H1X3 360 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 GPCPD1Q9NPB8 672 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 USP25Q9UHP3 1055 aa25.72■■□□□ 1.71
PDLIM2-203ENST00000339162 DLGAP5Q15398 846 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 BLIDQ8IZY5 108 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 STXBP3O00186 592 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 GDF11O95390 407 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 SYKP43405 635 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 CXCL9Q07325 125 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 SH3GLB2Q9NR46 395 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 BARHL2Q9NY43 387 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 HPSEQ9Y251 543 aa25.71■■□□□ 1.71
PDLIM2-203ENST00000339162 RAD21O60216 631 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 NPM3O75607 178 aaKnown RBP25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 PTPREP23469 700 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 LUZP1Q86V48 1076 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 CCDC17Q96LX7 622 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 CSRNP1Q96S65 589 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 TAOK3Q9H2K8 898 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 HDAC9Q9UKV0 1011 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 NOL7Q9UMY1 257 aaKnown RBP25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 PCDHA4Q9UN74 947 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 BCS1LQ9Y276 419 aa25.7■■□□□ 1.7
PDLIM2-203ENST00000339162 CALML3P27482 149 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 RRP36Q96EU6 259 aaKnown RBP25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 CEP131Q9UPN4 1083 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 PSME4Q14997 1843 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 ENTPD3O75355 529 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 PLCB2Q00722 1185 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 UVSSAQ2YD98 709 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 TTC38Q5R3I4 469 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 FAM200AQ8TCP9 573 aa25.69■■□□□ 1.7
PDLIM2-203ENST00000339162 FOXP4Q8IVH2 680 aaPredicted RBP25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 PDLIM2Q96JY6 352 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 ZNF70Q9UC06 446 aaPredicted RBP25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 NFKBIEO00221 500 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 SNHG28P0DPA3 235 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 EEF2P13639 858 aaKnown RBP25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 SEPT2Q15019 361 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 TTBK2Q6IQ55 1244 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 TATDN1Q6P1N9 297 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 TRIM44Q96DX7 344 aaPredicted RBP25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 VPS33BQ9H267 617 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 CBX8Q9HC52 389 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 TMOD2Q9NZR1 351 aa25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 SEC63Q9UGP8 760 aaKnown RBP25.68■■□□□ 1.7
PDLIM2-203ENST00000339162 SHTN1A0MZ66 631 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 NAPAP54920 295 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 KCTD1Q719H9 257 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 VEZTQ9HBM0 779 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 KCNH3Q9ULD8 1083 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 SRPRBQ9Y5M8 271 aaKnown RBP25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 JAG1P78504 1218 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 ASPRV1Q53RT3 343 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 USP49Q70CQ1 688 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 SGIP1Q9BQI5 828 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 CSRNP2Q9H175 543 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 RIOX1Q9H6W3 641 aa25.67■■□□□ 1.7
PDLIM2-203ENST00000339162 SLC16A2P36021 539 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 ZNF543Q08ER8 600 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 RRP1BQ14684 758 aaKnown RBP25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 C11orf57Q6ZUT1 292 aaPredicted RBP25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 CCDC148Q8NFR7 591 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 JDP2Q8WYK2 163 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 PCDHA6Q9UN73 950 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 PCDHA8Q9Y5H6 950 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 ATRNL1Q5VV63 1379 aa25.66■■□□□ 1.7
PDLIM2-203ENST00000339162 MCM7P33993 719 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 ZNF165P49910 485 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 CCDC96Q2M329 555 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 LONRF3Q496Y0 759 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 FAM237AA0A1B0GTK4 181 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 M0R2N6 131 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 PTGDRQ13258 359 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 CDAN1Q8IWY9 1227 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 KIAA1468Q9P260 1216 aa25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 SCAF8Q9UPN6 1271 aaKnown RBP25.65■■□□□ 1.7
PDLIM2-203ENST00000339162 AP5Z1O43299 807 aa25.64■■□□□ 1.7
PDLIM2-203ENST00000339162 ABCB5Q2M3G0 1257 aa25.64■■□□□ 1.7
PDLIM2-203ENST00000339162 SIAH1Q8IUQ4 282 aa25.64■■□□□ 1.7
PDLIM2-203ENST00000339162 RTN4Q9NQC3 1192 aaKnown RBP25.64■■□□□ 1.7
PDLIM2-203ENST00000339162 GREB1LQ9C091 1923 aaPredicted RBP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms