RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 FOXP1Q9H334 677 aaPredicted RBP15.87■□□□□ 0.13
PCDH8-201ENST00000338862 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
PCDH8-201ENST00000338862 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
PCDH8-201ENST00000338862 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
PCDH8-201ENST00000338862 NDUFA10O95299 355 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 PARP1P09874 1014 aaKnown RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 KLK7P49862 253 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 ERVK-24P63145 666 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 NTRK3Q16288 839 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 DTHD1Q6ZMT9 781 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 TMEM139Q8IV31 216 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 KIFC2Q96AC6 838 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 KAT14Q9H8E8 782 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 TBC1D7Q9P0N9 293 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 MON2Q7Z3U7 1717 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 LRRIQ3A6PVS8 624 aaPredicted RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 RNF225M0QZC1 329 aaPredicted RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 WNT7AO00755 349 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 PAFAH1B1P43034 410 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 SPAG1Q07617 926 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 EXOC1Q9NV70 894 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 ACTN4O43707 911 aaKnown RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 CAVIN4Q5BKX8 364 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 BEND6Q5SZJ8 279 aaPredicted RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 PANX2Q96RD6 677 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
PCDH8-201ENST00000338862 PCDH11XQ9BZA7 1347 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 PCDH11YQ9BZA8 1340 aa15.86■□□□□ 0.13
PCDH8-201ENST00000338862 PDE8AO60658 829 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 PRCPP42785 496 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 HSPA2P54652 639 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 BCAS4Q8TDM0 211 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 EHD2Q9NZN4 543 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 ADD3Q9UEY8 706 aaKnown RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 A0A1B0GTH6 734 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 EBAG9O00559 213 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 GGCXP38435 758 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 RIPOR2Q9Y4F9 1068 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 EIF3CLB5ME19 914 aaKnown RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 CLSTN1O94985 981 aa15.85■□□□□ 0.13
PCDH8-201ENST00000338862 RSRC2Q7L4I2 434 aaKnown RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 ZSCAN10Q96SZ4 725 aaPredicted RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 EIF3CQ99613 913 aaKnown RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 KDM6AO15550 1401 aaPredicted RBP15.85■□□□□ 0.13
PCDH8-201ENST00000338862 SRLQ86TD4 932 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 SLC39A2Q9NP94 309 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 TCP11L1Q9NUJ3 509 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 SAP30BPQ9UHR5 308 aaKnown RBP15.84■□□□□ 0.13
PCDH8-201ENST00000338862 CPDO75976 1380 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 LIFRP42702 1097 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 SETQ01105 290 aaPredicted RBP15.84■□□□□ 0.13
PCDH8-201ENST00000338862 DPYDQ12882 1025 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 TRIML1Q8N9V2 468 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 NAA15Q9BXJ9 866 aaKnown RBP15.84■□□□□ 0.13
PCDH8-201ENST00000338862 EHD4Q9H223 541 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 ESYT3A0FGR9 886 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 CYP2D6P10635 497 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
PCDH8-201ENST00000338862 NOP2P46087 812 aaKnown RBP15.84■□□□□ 0.13
PCDH8-201ENST00000338862 GNGT1P63211 74 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 KRT83P78385 493 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 WHAMMP3Q1A5X7 153 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 PROCA1Q8NCQ7 364 aaPredicted RBP15.84■□□□□ 0.13
PCDH8-201ENST00000338862 KANSL2Q9H9L4 492 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
PCDH8-201ENST00000338862 RICTORQ6R327 1708 aa15.83■□□□□ 0.13
PCDH8-201ENST00000338862 ATP8B1O43520 1251 aa15.83■□□□□ 0.13
PCDH8-201ENST00000338862 KCNJ6P48051 423 aa15.83■□□□□ 0.13
PCDH8-201ENST00000338862 TCP11X2Q5H9J9 407 aa15.83■□□□□ 0.13
PCDH8-201ENST00000338862 SPTY2D1Q68D10 685 aaPredicted RBP15.83■□□□□ 0.13
PCDH8-201ENST00000338862 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.13
PCDH8-201ENST00000338862 GSDMAQ96QA5 445 aa15.83■□□□□ 0.13
PCDH8-201ENST00000338862 MED15Q96RN5 788 aa15.83■□□□□ 0.13
PCDH8-201ENST00000338862 KRT18P05783 430 aaKnown RBP15.83■□□□□ 0.12
PCDH8-201ENST00000338862 TXKP42681 527 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 EVX2Q03828 476 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 RRAGAQ7L523 313 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
PCDH8-201ENST00000338862 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.12
PCDH8-201ENST00000338862 PIGBQ92521 554 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 NCAPD2Q15021 1401 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.12
PCDH8-201ENST00000338862 NDUFAB1O14561 156 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 NCK2O43639 380 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 EIF6P56537 245 aaKnown RBP15.83■□□□□ 0.12
PCDH8-201ENST00000338862 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 ENAHQ8N8S7 591 aaPredicted RBP15.83■□□□□ 0.12
PCDH8-201ENST00000338862 UBA5Q9GZZ9 404 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 RMND1Q9NWS8 449 aa15.83■□□□□ 0.12
PCDH8-201ENST00000338862 MOCS3O95396 460 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 KLHL7Q8IXQ5 586 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 SECISBP2LQ93073 1101 aaKnown RBP15.82■□□□□ 0.12
PCDH8-201ENST00000338862 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 TMCO5BA8MYB1 307 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms