RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RGPD8O14715 1765 aaPredicted RBP9.26□□□□□ -0.93
HPS4-201ENST00000336873 KLRF2D3W0D1 207 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 ERLIN1O75477 346 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CALM1P0DP23 149 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CALM2P0DP24 149 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CALM3P0DP25 149 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CAPN2P17655 700 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 OAS2P29728 719 aaKnown RBP9.25□□□□□ -0.93
HPS4-201ENST00000336873 KSR1Q8IVT5 923 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CCDC43Q96MW1 224 aaKnown RBP9.25□□□□□ -0.93
HPS4-201ENST00000336873 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
HPS4-201ENST00000336873 ZBTB21Q9ULJ3 1066 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 B4DLN1 442 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 CHMP2AO43633 222 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
HPS4-201ENST00000336873 HLTFQ14527 1009 aaKnown RBP eCLIP9.25□□□□□ -0.93
HPS4-201ENST00000336873 MFSD14BQ5SR56 506 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 NBPF11Q86T75 865 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 MARCH10Q8NA82 808 aaPredicted RBP9.25□□□□□ -0.93
HPS4-201ENST00000336873 CCDC148Q8NFR7 591 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 IFT81Q8WYA0 676 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 GOLGA1Q92805 767 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 TCEAL9Q9UHQ7 104 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 TOPAZ1Q8N9V7 1692 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 SMCO2A6NFE2 343 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 SCG2P13521 617 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 TBC1D9BQ66K14 1250 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 KCNB2Q92953 911 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 IMPACTQ9P2X3 320 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 HDAC6Q9UBN7 1215 aa9.25□□□□□ -0.93
HPS4-201ENST00000336873 SCAF8Q9UPN6 1271 aaKnown RBP9.25□□□□□ -0.93
HPS4-201ENST00000336873 KCNJ18B7U540 433 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 TRAF5O00463 557 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 BUB1O43683 1085 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 ITPK1Q13572 414 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 KCNJ12Q14500 433 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 GSPT2Q8IYD1 628 aaKnown RBP9.24□□□□□ -0.93
HPS4-201ENST00000336873 CNBD1Q8NA66 436 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 RDH13Q8NBN7 331 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 SECISBP2LQ93073 1101 aaKnown RBP9.24□□□□□ -0.93
HPS4-201ENST00000336873 PAGE5Q96GU1 130 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 FEZ1Q99689 392 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 MINPP1Q9UNW1 487 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 UTRNP46939 3433 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 ATP2C2O75185 946 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 MORC3Q14149 939 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 VSTM4Q8IW00 320 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 SPICE1Q8N0Z3 855 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
HPS4-201ENST00000336873 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
HPS4-201ENST00000336873 PTPREP23469 700 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 TOB1P50616 345 aaPredicted RBP9.24□□□□□ -0.93
HPS4-201ENST00000336873 SP4Q02446 784 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 RESP18Q5W5W9 173 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 C2CD5Q86YS7 1000 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 BLIDQ8IZY5 108 aa9.24□□□□□ -0.93
HPS4-201ENST00000336873 PPP6R2O75170 966 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 UBXN2AP68543 259 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 SMC1AQ14683 1233 aaKnown RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 DCAF17Q5H9S7 520 aaPredicted RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 KIAA0825Q8IV33 1275 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 SRBD1Q8N5C6 995 aaKnown RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 EYA3Q99504 573 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 CHP1Q99653 195 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 PARD6BQ9BYG5 372 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 RTL9Q8NET4 1388 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 MYH15Q9Y2K3 1946 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 WNT7AO00755 349 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 PARP1P09874 1014 aaKnown RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 CYP4A11Q02928 519 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 ODF2Q5BJF6 829 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 SH3RF3Q8TEJ3 882 aaPredicted RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 FAM84BQ96KN1 310 aaPredicted RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 PDE11AQ9HCR9 933 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 LIFRP42702 1097 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 NFIXQ14938 502 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 TRAPPC3LQ5T215 181 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 CTR9Q6PD62 1173 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 LRP10Q7Z4F1 713 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 MXD3Q9BW11 206 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 ZC3H12CQ9C0D7 883 aaKnown RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 MRPL44Q9H9J2 332 aaKnown RBP9.23□□□□□ -0.93
HPS4-201ENST00000336873 BCS1LQ9Y276 419 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 ZNF804BA4D1E1 1349 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 CPDO75976 1380 aa9.23□□□□□ -0.93
HPS4-201ENST00000336873 H0YHG0 523 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 FOXP2O15409 715 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 ZEB2O60315 1214 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 RPN1P04843 607 aaKnown RBP9.22□□□□□ -0.93
HPS4-201ENST00000336873 CSF1RP07333 972 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 FXR1P51114 621 aaKnown RBP eCLIP9.22□□□□□ -0.93
HPS4-201ENST00000336873 RAPGEF1Q13905 1077 aa9.22□□□□□ -0.93
HPS4-201ENST00000336873 SYCP1Q15431 976 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms