RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 USP54Q70EL1 1684 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 PALLDQ8WX93 1383 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 TECP42680 631 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 NELFCDQ8IXH7 590 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 POLD4Q9HCU8 107 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 FAN1Q9Y2M0 1017 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 PCDHB6Q9Y5E3 794 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 STRCP1A6NGW2 1772 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 CTAGE9A4FU28 777 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 SMCO2A6NFE2 343 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 CFBP00751 764 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 SERPINB2P05120 415 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 CYP2C19P33261 490 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 MECOMQ03112 1051 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 PTPROQ16827 1216 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 LINC00301Q8NCQ3 95 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 RGS22Q8NE09 1264 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 EPSTI1Q96J88 318 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 RRP15Q9Y3B9 282 aaKnown RBP7.26□□□□□ -1.25
HMG20A-201ENST00000336216 PLEKHG2Q9H7P9 1386 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 GOLGA6L9A6NEM1 432 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 WTIPA6NIX2 430 aaPredicted RBP7.26□□□□□ -1.25
HMG20A-201ENST00000336216 TRAF5O00463 557 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 SORBS3O60504 671 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 CUTAO60888 179 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 CDC27P30260 824 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 TBC1D8BQ0IIM8 1120 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 LARGE2Q8N3Y3 721 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 GPR161Q8N6U8 529 aaKnown RBP7.26□□□□□ -1.25
HMG20A-201ENST00000336216 PRM3Q9NNZ6 103 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 CLRN2A0PK11 232 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 PLCG2P16885 1265 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 KIF23Q02241 960 aaPredicted RBP7.26□□□□□ -1.25
HMG20A-201ENST00000336216 GRM1Q13255 1194 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 MTF1Q14872 753 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 TTC19Q6DKK2 380 aaPredicted RBP7.26□□□□□ -1.25
HMG20A-201ENST00000336216 TOGARAM2Q6ZUX3 1019 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 HDXQ7Z353 690 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 SLF1Q9BQI6 1058 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 ISCA1Q9BUE6 129 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 CSRNP2Q9H175 543 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 SUGCTQ9HAC7 445 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 GPR108Q9NPR9 543 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.26□□□□□ -1.25
HMG20A-201ENST00000336216 MINPP1Q9UNW1 487 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 PXDNQ92626 1479 aa7.26□□□□□ -1.25
HMG20A-201ENST00000336216 ZMYM6O95789 1325 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 NEDD4P46934 1319 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 SOWAHDA6NJG2 315 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 AKR1B15C9JRZ8 316 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 UBE4AQ14139 1066 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 TBC1D10BQ4KMP7 808 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 SEPT12Q8IYM1 358 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 RGPD5Q99666 1765 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 TCP10L2B9ZVM9 353 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 FOXN1O15353 648 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 TBCAO75347 108 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 BMP15O95972 392 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 UBXN2AP68543 259 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 DCAF17Q5H9S7 520 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 TAX1BP1Q86VP1 789 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 CSGALNACT2Q8N6G5 542 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 MARCH10Q8NA82 808 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 RDH13Q8NBN7 331 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 OXER1Q8TDS5 423 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 GBP3Q9H0R5 595 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 LRWD1Q9UFC0 647 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 FEZ2Q9UHY8 353 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 RIPOR2Q9Y4F9 1068 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 OVOS2A0A0G2JMS6 1433 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 H0YIN7 160 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 ENC1O14682 589 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 ATP2C2O75185 946 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 IVLP07476 585 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 GUCY1A2P33402 732 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 KRT9P35527 623 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 SNAP25P60880 206 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 MRPS25P82663 173 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 RNF187Q5TA31 235 aaPredicted RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 JDP2Q8WYK2 163 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 TAF4BQ92750 862 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 ARHGEF1Q92888 912 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 COA7Q96BR5 231 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 CCDC42Q96M95 316 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 SAMSN1Q9NSI8 373 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 RBM28Q9NW13 759 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 SCAF8Q9UPN6 1271 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 LUC7L2Q9Y383 392 aaKnown RBP7.25□□□□□ -1.25
HMG20A-201ENST00000336216 CEMIPQ8WUJ3 1361 aa7.25□□□□□ -1.25
HMG20A-201ENST00000336216 PPIP5K2O43314 1243 aa7.24□□□□□ -1.25
HMG20A-201ENST00000336216 KIAA0754O94854 1291 aa7.24□□□□□ -1.25
HMG20A-201ENST00000336216 CMA1P23946 247 aa7.24□□□□□ -1.25
HMG20A-201ENST00000336216 HLTFQ14527 1009 aaKnown RBP eCLIP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms