RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CCL15Q16663 113 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 ME3Q16798 604 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 TMOD4Q9NZQ9 345 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 LIMCH1Q9UPQ0 1083 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 BAZ2BQ9UIF8 2168 aaKnown RBP20.44■□□□□ 0.86
CHGA-202ENST00000334654 MANSC4A6NHS7 340 aaPredicted RBP20.43■□□□□ 0.86
CHGA-202ENST00000334654 WDR46O15213 610 aaKnown RBP20.43■□□□□ 0.86
CHGA-202ENST00000334654 AOC2O75106 756 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 BMP3P12645 472 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 CDC27P30260 824 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 SLC1A4P43007 532 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 VEGFBP49765 207 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 GADL1Q6ZQY3 521 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 PAXIP1Q6ZW49 1069 aaPredicted RBP20.43■□□□□ 0.86
CHGA-202ENST00000334654 KCTD1Q719H9 257 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 FASTKD5Q7L8L6 764 aaKnown RBP20.43■□□□□ 0.86
CHGA-202ENST00000334654 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 FANCBQ8NB91 859 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 NUP133Q8WUM0 1156 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 GOLGA8BA8MQT2 603 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 BTBD19C9JJ37 291 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 CALM1P0DP23 149 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 CALM2P0DP24 149 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 CALM3P0DP25 149 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 KIF23Q02241 960 aaPredicted RBP20.43■□□□□ 0.86
CHGA-202ENST00000334654 GRM1Q13255 1194 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 SLC35G1Q2M3R5 365 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 CATSPERGQ6ZRH7 1159 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 CCDC144CPQ8IYA2 1237 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 RPAP3Q9H6T3 665 aaPredicted RBP20.43■□□□□ 0.86
CHGA-202ENST00000334654 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 AGTPBP1Q9UPW5 1226 aa20.43■□□□□ 0.86
CHGA-202ENST00000334654 FRMPD2Q68DX3 1309 aaPredicted RBP20.42■□□□□ 0.86
CHGA-202ENST00000334654 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
CHGA-202ENST00000334654 PFKFB2O60825 505 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 HOXA7P31268 230 aaPredicted RBP20.42■□□□□ 0.86
CHGA-202ENST00000334654 TM4SF4P48230 202 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 ST3GAL1Q11201 340 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 NOGQ13253 232 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 SYNE3Q6ZMZ3 975 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 SNX21Q969T3 373 aa20.42■□□□□ 0.86
CHGA-202ENST00000334654 GOLGA8AA7E2F4 631 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 IGF2BP3O00425 579 aaKnown RBP eCLIP20.41■□□□□ 0.86
CHGA-202ENST00000334654 PARP1P09874 1014 aaKnown RBP20.41■□□□□ 0.86
CHGA-202ENST00000334654 ADD1P35611 737 aaKnown RBP20.41■□□□□ 0.86
CHGA-202ENST00000334654 CCT2P78371 535 aaKnown RBP20.41■□□□□ 0.86
CHGA-202ENST00000334654 STK3Q13188 491 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 ASPRV1Q53RT3 343 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 GPATCH4Q5T3I0 446 aaKnown RBP20.41■□□□□ 0.86
CHGA-202ENST00000334654 BTNL9Q6UXG8 535 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 ANKRD23Q86SG2 305 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 NBPF11Q86T75 865 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 NCOA5Q9HCD5 579 aaKnown RBP20.41■□□□□ 0.86
CHGA-202ENST00000334654 GPCPD1Q9NPB8 672 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
CHGA-202ENST00000334654 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
CHGA-202ENST00000334654 USP17L15C9J2P7 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L13C9JLJ4 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 TMEM232C9JQI7 657 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L11C9JVI0 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L18D6R9N7 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L22D6RA61 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L17D6RBQ6 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L19D6RCP7 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L20D6RJB6 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 PLA2G6O60733 806 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 METAP2P50579 478 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHGA-202ENST00000334654 INHBEP58166 350 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 USP17L24Q0WX57 530 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 SCRN1Q12765 414 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 CCDC96Q2M329 555 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 CPVLQ9H3G5 476 aa20.4■□□□□ 0.86
CHGA-202ENST00000334654 THSD7BQ9C0I4 1608 aa20.39■□□□□ 0.86
CHGA-202ENST00000334654 KLRF2D3W0D1 207 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 PLEKHA8P1O95397 391 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 MCM2P49736 904 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 FUT2Q10981 343 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 NTRK3Q16288 839 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 RTN1Q16799 776 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 POTEEQ6S8J3 1075 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 SRBD1Q8N5C6 995 aaKnown RBP20.39■□□□□ 0.85
CHGA-202ENST00000334654 NECAB1Q8N987 351 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 CTCFLQ8NI51 663 aaPredicted RBP20.39■□□□□ 0.85
CHGA-202ENST00000334654 TMX3Q96JJ7 454 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 ZSCAN31Q96LW9 406 aaPredicted RBP20.39■□□□□ 0.85
CHGA-202ENST00000334654 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
CHGA-202ENST00000334654 CYTH3O43739 400 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 KIF5BP33176 963 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 SLC16A2P36021 539 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 PPP2R5BQ15173 497 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 TMTC3Q6ZXV5 915 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 IFNL1Q8IU54 200 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 TANGO6Q9C0B7 1094 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
CHGA-202ENST00000334654 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms