RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 CCDC13Q8IYE1 715 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 KRT12Q99456 494 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 MSH6P52701 1360 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 MCF2P10911 925 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 ZNF530Q6P9A1 599 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 TRIM56Q9BRZ2 755 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 TMCO5AQ8N6Q1 288 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 AP2B1P63010 937 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 ST5P78524 1137 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 HIBCHQ6NVY1 386 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 NPR1P16066 1061 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 CALML3P27482 149 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 PDE6CP51160 858 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 WDR44Q5JSH3 913 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 ZPR1O75312 459 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 FLOT2Q14254 428 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 BBOF1Q8ND07 529 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 LRRC8CQ8TDW0 803 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 ZNF483Q8TF39 744 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 RMI1Q9H9A7 625 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 KPNB1Q14974 876 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 NOC2LQ9Y3T9 749 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 CORO7P57737 925 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 TRIML1Q8N9V2 468 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 NSD3Q9BZ95 1437 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 KRT80Q6KB66 452 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 CTNND1O60716 968 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 EPB41P11171 864 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 CNNM4Q6P4Q7 775 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 CASP10Q92851 521 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 SCYL1Q96KG9 808 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 PSMB7Q99436 277 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 ATG3Q9NT62 314 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 ZBTB21Q9ULJ3 1066 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 PACSIN2Q9UNF0 486 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 E7ENQ6 273 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 S100BP04271 92 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 NDUFA13Q9P0J0 144 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 KRT4P19013 534 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 WTAPQ15007 396 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 PALM2Q8IXS6 379 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 STX8Q9UNK0 236 aa11.3□□□□□ -0.6
SPTBN1-201ENST00000333896 STARD3NLO95772 234 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 COPG1Q9Y678 874 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 CFTRP13569 1480 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 CCND1P24385 295 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 DAB2P98082 770 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 FLCNQ8NFG4 579 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 C6orf50Q9HD87 102 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 RINLQ6ZS11 566 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 CCDC105Q8IYK2 499 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 DBNLQ9UJU6 430 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 KIF22Q14807 665 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 KLHL7Q8IXQ5 586 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 TDRD7Q8NHU6 1098 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 RPL13P26373 211 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 CCDC15Q0P6D6 951 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 VPS37BQ9H9H4 285 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 MRPL40Q9NQ50 206 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 PDP2Q9P2J9 529 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 ARHGAP44Q17R89 818 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 TRIM75PA6NK02 468 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 ANKRD7Q92527 254 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
SPTBN1-201ENST00000333896 APOA1P02647 267 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 KRT23Q9C075 422 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 PLEKHA4Q9H4M7 779 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 NAIPQ13075 1403 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms