RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ADCK5Q3MIX3 580 aa24.06■■□□□ 1.44
MRPL40-201ENST00000333130 IFIT1BQ5T764 474 aaKnown RBP24.06■■□□□ 1.44
MRPL40-201ENST00000333130 LBX2Q6XYB7 198 aa24.06■■□□□ 1.44
MRPL40-201ENST00000333130 CYB5R4Q7L1T6 521 aa24.06■■□□□ 1.44
MRPL40-201ENST00000333130 ANKRD13CQ8N6S4 541 aa24.06■■□□□ 1.44
MRPL40-201ENST00000333130 RLFQ13129 1914 aa24.06■■□□□ 1.44
MRPL40-201ENST00000333130 IFIT3O14879 490 aaKnown RBP24.05■■□□□ 1.44
MRPL40-201ENST00000333130 BMP3P12645 472 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 ANAPC15P60006 121 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 IKQ13123 557 aaPredicted RBP24.05■■□□□ 1.44
MRPL40-201ENST00000333130 COL9A3Q14050 684 aaPredicted RBP24.05■■□□□ 1.44
MRPL40-201ENST00000333130 SAMD1Q6SPF0 538 aaPredicted RBP24.05■■□□□ 1.44
MRPL40-201ENST00000333130 MB21D1Q8N884 522 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 ENAHQ8N8S7 591 aaPredicted RBP24.05■■□□□ 1.44
MRPL40-201ENST00000333130 DCAF4Q8WV16 495 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 FEM1BQ9UK73 627 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 MTMR7Q9Y216 660 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 RABGAP1Q9Y3P9 1069 aa24.05■■□□□ 1.44
MRPL40-201ENST00000333130 SPDYE16A6NNV3 312 aaPredicted RBP24.04■■□□□ 1.44
MRPL40-201ENST00000333130 ANTXR2P58335 489 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 LACTBP83111 547 aaPredicted RBP24.04■■□□□ 1.44
MRPL40-201ENST00000333130 CCDC96Q2M329 555 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 CCAR1Q8IX12 1150 aaKnown RBP24.04■■□□□ 1.44
MRPL40-201ENST00000333130 NEK1Q96PY6 1258 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 SLF1Q9BQI6 1058 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 MTA3Q9BTC8 594 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 PAGR1Q9BTK6 254 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 CTDP1Q9Y5B0 961 aaPredicted RBP24.04■■□□□ 1.44
MRPL40-201ENST00000333130 A0A0G2JMZ2 1700 aa24.04■■□□□ 1.44
MRPL40-201ENST00000333130 HMGB1P09429 215 aaKnown RBP24.03■■□□□ 1.44
MRPL40-201ENST00000333130 DSG3P32926 999 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 STAT2P52630 851 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 CCNA1P78396 465 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 RCSD1Q6JBY9 416 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 PNMA1Q8ND90 353 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 GPRC5AQ8NFJ5 357 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 CD99L2Q8TCZ2 262 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 CHURC1Q8WUH1 139 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 ANKS1AQ92625 1134 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 NUP88Q99567 741 aaPredicted RBP24.03■■□□□ 1.44
MRPL40-201ENST00000333130 MORF4L1Q9UBU8 362 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 COL11A1P12107 1806 aaPredicted RBP24.03■■□□□ 1.44
MRPL40-201ENST00000333130 WDR19Q8NEZ3 1342 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 GNRH1P01148 92 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 FCGRTP55899 365 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 WTAPQ15007 396 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 TMEM67Q5HYA8 995 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 CTU1Q7Z7A3 348 aaKnown RBP24.03■■□□□ 1.44
MRPL40-201ENST00000333130 FAM160B2Q86V87 743 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 PPP1R9AQ9ULJ8 1098 aa24.03■■□□□ 1.44
MRPL40-201ENST00000333130 PRC1O43663 620 aa24.02■■□□□ 1.44
MRPL40-201ENST00000333130 ERVK-9P63128 1117 aa24.02■■□□□ 1.44
MRPL40-201ENST00000333130 ERVK-24P63145 666 aa24.02■■□□□ 1.44
MRPL40-201ENST00000333130 SEC23AQ15436 765 aa24.02■■□□□ 1.44
MRPL40-201ENST00000333130 PRPF38AQ8NAV1 312 aaKnown RBP24.02■■□□□ 1.44
MRPL40-201ENST00000333130 TMEM87BQ96K49 555 aa24.02■■□□□ 1.44
MRPL40-201ENST00000333130 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
MRPL40-201ENST00000333130 EFCC1Q9HA90 598 aa24.02■■□□□ 1.44
MRPL40-201ENST00000333130 CWC22Q9HCG8 908 aaKnown RBP24.02■■□□□ 1.44
MRPL40-201ENST00000333130 TMEM232C9JQI7 657 aa24.01■■□□□ 1.43
MRPL40-201ENST00000333130 FMNL1O95466 1100 aaPredicted RBP24.01■■□□□ 1.43
MRPL40-201ENST00000333130 HOXD10P28358 340 aa24.01■■□□□ 1.43
MRPL40-201ENST00000333130 RBM25P49756 843 aaKnown RBP24.01■■□□□ 1.43
MRPL40-201ENST00000333130 TM6SF1Q9BZW5 370 aa24.01■■□□□ 1.43
MRPL40-201ENST00000333130 FDX1P10109 184 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 PSMA5P28066 241 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 PSMC4P43686 418 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 EXOSC10Q01780 885 aaKnown RBP24■■□□□ 1.43
MRPL40-201ENST00000333130 PKN2Q16513 984 aaKnown RBP24■■□□□ 1.43
MRPL40-201ENST00000333130 GPATCH4Q5T3I0 446 aaKnown RBP24■■□□□ 1.43
MRPL40-201ENST00000333130 DHX32Q7L7V1 743 aaKnown RBP24■■□□□ 1.43
MRPL40-201ENST00000333130 CHST3Q7LGC8 479 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 TMTC2Q8N394 836 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 KIFC2Q96AC6 838 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 ATG4CQ96DT6 458 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 FBXO28Q9NVF7 368 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 RBPJLQ9UBG7 517 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 TRIM17Q9Y577 477 aa24■■□□□ 1.43
MRPL40-201ENST00000333130 PLA2G6O60733 806 aa23.99■■□□□ 1.43
MRPL40-201ENST00000333130 PDHBP11177 359 aa23.99■■□□□ 1.43
MRPL40-201ENST00000333130 KCTD1Q719H9 257 aa23.99■■□□□ 1.43
MRPL40-201ENST00000333130 IGDCC4Q8TDY8 1250 aa23.99■■□□□ 1.43
MRPL40-201ENST00000333130 C22orf23Q9BZE7 217 aa23.99■■□□□ 1.43
MRPL40-201ENST00000333130 UPF2Q9HAU5 1272 aaKnown RBP23.99■■□□□ 1.43
MRPL40-201ENST00000333130 ZSWIM8A7E2V4 1837 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 TNPO2O14787 897 aaKnown RBP23.98■■□□□ 1.43
MRPL40-201ENST00000333130 ZBED4O75132 1171 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 MAPK4P31152 587 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 PLS1Q14651 629 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 NFXL1Q6ZNB6 911 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 COA7Q96BR5 231 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 CHMP4CQ96CF2 233 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 ZSWIM6Q9HCJ5 1215 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 TXNRD2Q9NNW7 524 aa23.98■■□□□ 1.43
MRPL40-201ENST00000333130 VWA5AO00534 786 aa23.97■■□□□ 1.43
MRPL40-201ENST00000333130 CASTP20810 708 aaKnown RBP23.97■■□□□ 1.43
MRPL40-201ENST00000333130 PRMT2P55345 433 aa23.97■■□□□ 1.43
MRPL40-201ENST00000333130 FGD1P98174 961 aa23.97■■□□□ 1.43
MRPL40-201ENST00000333130 ASPRV1Q53RT3 343 aa23.97■■□□□ 1.43
MRPL40-201ENST00000333130 BLOC1S2Q6QNY1 142 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms