RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 RPTORQ8N122 1335 aa14.54□□□□□ -0.08
CMTM1-203ENST00000333001 PLIN4Q96Q06 1357 aa14.54□□□□□ -0.08
CMTM1-203ENST00000333001 CCDC171Q6TFL3 1326 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 SLC25A27O95847 323 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 FGAP02671 866 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 HSPD1P10809 573 aaKnown RBP14.53□□□□□ -0.08
CMTM1-203ENST00000333001 PCP11498 1178 aaKnown RBP14.53□□□□□ -0.08
CMTM1-203ENST00000333001 ZKSCAN1P17029 563 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-203ENST00000333001 COPB2P35606 906 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
CMTM1-203ENST00000333001 CEP95Q96GE4 821 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 PAK6Q9NQU5 681 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-203ENST00000333001 DIAPH3Q9NSV4 1193 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 ADAMTS5Q9UNA0 930 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 RLFQ13129 1914 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
CMTM1-203ENST00000333001 TSPY2A6NKD2 308 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 FOXP2O15409 715 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 ORC4O43929 436 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 TFRCP02786 760 aaKnown RBP14.52□□□□□ -0.09
CMTM1-203ENST00000333001 FGRP09769 529 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 NT5C2P49902 561 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 IRX6P78412 446 aaPredicted RBP14.52□□□□□ -0.09
CMTM1-203ENST00000333001 GRB14Q14449 540 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 PLS1Q14651 629 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 FAM83BQ5T0W9 1011 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 VPS53Q5VIR6 699 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 ABRAQ8N0Z2 381 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.09
CMTM1-203ENST00000333001 GMCL1P1Q8NEA9 526 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 ATG4CQ96DT6 458 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 MOV10L1Q9BXT6 1211 aaKnown RBP14.52□□□□□ -0.09
CMTM1-203ENST00000333001 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.52□□□□□ -0.09
CMTM1-203ENST00000333001 PLXNB2O15031 1838 aa14.52□□□□□ -0.09
CMTM1-203ENST00000333001 NDUFB10O96000 172 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 HOXC6P09630 235 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 ERCC3P19447 782 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 FXR1P51114 621 aaKnown RBP eCLIP14.51□□□□□ -0.09
CMTM1-203ENST00000333001 CTDSPL2Q05D32 466 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 MFSD14CQ5VZR4 134 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 DPP9Q86TI2 863 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 TRIB2Q92519 343 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 DEFB118Q96PH6 123 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 SLF1Q9BQI6 1058 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.51□□□□□ -0.09
CMTM1-203ENST00000333001 RNF41Q9H4P4 317 aaPredicted RBP14.51□□□□□ -0.09
CMTM1-203ENST00000333001 FEM1BQ9UK73 627 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
CMTM1-203ENST00000333001 CEP290O15078 2479 aa14.51□□□□□ -0.09
CMTM1-203ENST00000333001 VWA5AO00534 786 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 RANBP6O60518 1105 aaKnown RBP14.5□□□□□ -0.09
CMTM1-203ENST00000333001 FDX1P10109 184 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
CMTM1-203ENST00000333001 CWC27Q6UX04 472 aaKnown RBP14.5□□□□□ -0.09
CMTM1-203ENST00000333001 ZNF589Q86UQ0 364 aaPredicted RBP14.5□□□□□ -0.09
CMTM1-203ENST00000333001 NCAPG2Q86XI2 1143 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 RIOX2Q8IUF8 465 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 ANKLE1Q8NAG6 615 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 HTATIP2Q9BUP3 242 aa14.5□□□□□ -0.09
CMTM1-203ENST00000333001 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
CMTM1-203ENST00000333001 ZBED4O75132 1171 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 FCER1AP12319 257 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
CMTM1-203ENST00000333001 STAT3P40763 770 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 TMEM132BQ14DG7 1078 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 SLFN13Q68D06 897 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 MFSD6Q6ZSS7 791 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 CHURC1Q8WUH1 139 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 DPF3Q92784 378 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 SHISA4Q96DD7 197 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 CRISPLD2Q9H0B8 497 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 TOMM22Q9NS69 142 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 FBXO28Q9NVF7 368 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 CTNNA3Q9UI47 895 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 STX8Q9UNK0 236 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 PARP14Q460N5 1801 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 A0A0G2JMZ2 1700 aa14.49□□□□□ -0.09
CMTM1-203ENST00000333001 SZT2Q5T011 3432 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 ZNF213O14771 459 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 ATP2A1O14983 1001 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 FARP2O94887 1054 aaPredicted RBP14.48□□□□□ -0.09
CMTM1-203ENST00000333001 BMP3P12645 472 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 ADORA2AP29274 412 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 SLC1A4P43007 532 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 AKNAD1Q5T1N1 836 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 TTC22Q5TAA0 569 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 OLFML2BQ68BL8 750 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 RUFY2Q8WXA3 655 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 GMCL1Q96IK5 515 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 DSCC1Q9BVC3 393 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 TCP11L1Q9NUJ3 509 aa14.48□□□□□ -0.09
CMTM1-203ENST00000333001 ZNFX1Q9P2E3 1918 aaKnown RBP14.47□□□□□ -0.09
CMTM1-203ENST00000333001 H0YGN5 161 aa14.47□□□□□ -0.09
CMTM1-203ENST00000333001 MSCO60682 206 aa14.47□□□□□ -0.09
CMTM1-203ENST00000333001 PLA2G6O60733 806 aa14.47□□□□□ -0.09
CMTM1-203ENST00000333001 PDE4AP27815 886 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms