RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 hCG_1642624A0A1W2PR95 340 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 RAD21O60216 631 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 PPP1R12BO60237 982 aaPredicted RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 ZSCAN22P10073 491 aaPredicted RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 PTPRAP18433 802 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 SMARCA1P28370 1054 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 NF2P35240 595 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 SLC1A4P43007 532 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 FOSBP53539 338 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 PKN1Q16512 942 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 CCDC96Q2M329 555 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 WASF1Q92558 559 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 C8orf76Q96K31 380 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 CPVLQ9H3G5 476 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 V9GY48 417 aaPredicted RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 KIAA1755Q5JYT7 1200 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 PPP1R3FQ6ZSY5 799 aaPredicted RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 KCTD1Q719H9 257 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 RGS22Q8NE09 1264 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 FEZ1Q99689 392 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 VCPKMTQ9H867 229 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 GOPCQ9HD26 462 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 GPCPD1Q9NPB8 672 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 PICK1Q9NRD5 415 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 GJB4Q9NTQ9 266 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 RBM27Q9P2N5 1060 aaKnown RBP14□□□□□ -0.17
TRIM49B-201ENST00000332682 SNCAIPQ9Y6H5 919 aa14□□□□□ -0.17
TRIM49B-201ENST00000332682 H3BQV1 296 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 TRAF5O00463 557 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 F13A1P00488 732 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 IREB2P48200 963 aaKnown RBP13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 VGLL4Q14135 290 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 MAP3K11Q16584 847 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 TTBK2Q6IQ55 1244 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 UBA5Q9GZZ9 404 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 KIAA1683Q9H0B3 1180 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 RIOX1Q9H6W3 641 aa13.99□□□□□ -0.17
TRIM49B-201ENST00000332682 BMP3P12645 472 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 SCG2P13521 617 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 GUCY1B3Q02153 619 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 MTMR2Q13614 643 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 PFKFB3Q16875 520 aaPredicted RBP13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 KRT40Q6A162 431 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 MOB2Q70IA6 237 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 PIBF1Q8WXW3 757 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 SHISA4Q96DD7 197 aa13.98□□□□□ -0.17
TRIM49B-201ENST00000332682 PTPRFP10586 1907 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 SLC16A2P36021 539 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 FMR1Q06787 632 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 FERMT3Q86UX7 667 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 AS3MTQ9HBK9 375 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 ISY1Q9ULR0 285 aaKnown RBP13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 CSADQ9Y600 493 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 ZHX2Q9Y6X8 837 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 MYH15Q9Y2K3 1946 aa13.97□□□□□ -0.17
TRIM49B-201ENST00000332682 USP17L10C9JJH3 530 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 SPP2Q13103 211 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 TRIM29Q14134 588 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 TTLL12Q14166 644 aaPredicted RBP13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 CLEC17AQ6ZS10 378 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 ANKRD13AQ8IZ07 590 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 ADGRF4Q8IZF3 695 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 LPAR1Q92633 364 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 PIGSQ96S52 555 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 JMJD4Q9H9V9 463 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
TRIM49B-201ENST00000332682 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 TMEM232C9JQI7 657 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 USP14P54578 494 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 BACE1P56817 501 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 RESTQ13127 1097 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 DGKZQ13574 1117 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 BTNL9Q6UXG8 535 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 ARMC9Q7Z3E5 817 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 HOMER1Q86YM7 354 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 GPKOWQ92917 476 aaPredicted RBP eCLIP13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 MTMR8Q96EF0 704 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 CLMNQ96JQ2 1002 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 VAT1LQ9HCJ6 419 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms