RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 HPS3Q969F9 1004 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 F8W031 263 aaPredicted RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 SASH3O75995 380 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 PARP10Q53GL7 1025 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 SLC51AQ86UW1 340 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 FAM84BQ96KN1 310 aaPredicted RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 LUC7L2Q9Y383 392 aaKnown RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 MRFAP1Q9Y605 127 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 MYO5AQ9Y4I1 1855 aaKnown RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 MFAP3LO75121 409 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 TUBB4AP04350 444 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 RPN1P04843 607 aaKnown RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNF18P17022 549 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 TICAM2Q86XR7 235 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNHIT6Q9NWK9 470 aaKnown RBP13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
EFCAB13-201ENST00000331493 SRCAPQ6ZRS2 3230 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 KIF5BP33176 963 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 PRCPP42785 496 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 TMTC3Q6ZXV5 915 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 A0A1B0GTH6 734 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 ZPR1O75312 459 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 ERLIN1O75477 346 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 GYPCP04921 128 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 NAPAP54920 295 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 DYMQ7RTS9 669 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 NAPGQ99747 312 aaPredicted RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 RBM28Q9NW13 759 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 ADD3Q9UEY8 706 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 HNRNPH2P55795 449 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 TROAPQ12815 778 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 PHF20Q9BVI0 1012 aa13.29□□□□□ -0.28
EFCAB13-201ENST00000331493 B4DLN1 442 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 SEC23AQ15436 765 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CCDC47Q96A33 483 aaKnown RBP13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CALM1P0DP23 149 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CALM2P0DP24 149 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CALM3P0DP25 149 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 TBC1D8BQ0IIM8 1120 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CSGALNACT2Q8N6G5 542 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 ANKRD13CQ8N6S4 541 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 PPP1R3GB7ZBB8 358 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CCNT1O60563 726 aaKnown RBP13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CAMTA2O94983 1202 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 TXKP42681 527 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 PDE4DQ08499 809 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 FAM98CQ17RN3 349 aaKnown RBP13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 CDC23Q9UJX2 597 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 XDHP47989 1333 aa13.28□□□□□ -0.28
EFCAB13-201ENST00000331493 ANKRD65E5RJM6 399 aa13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 SARSP49591 514 aaKnown RBP13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 MMRN2Q9H8L6 949 aa13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 ABCB6Q9NP58 842 aa13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.28
EFCAB13-201ENST00000331493 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 PSMA7O14818 248 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 BMP15O95972 392 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 CAPN2P17655 700 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 TECP42680 631 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 ARID5AQ03989 594 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 PICALMQ13492 652 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 AK7Q96M32 723 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 CALCOCO1Q9P1Z2 691 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 VGLL3A8MV65 326 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 GNPATO15228 680 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 CEP112Q8N8E3 955 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 CCDC148Q8NFR7 591 aa13.27□□□□□ -0.29
EFCAB13-201ENST00000331493 RABGGTAQ92696 567 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms