RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 UBE2HP62256 183 aa18.14■□□□□ 0.49
PDGFB-201ENST00000331163 TCEAL9Q9UHQ7 104 aa18.14■□□□□ 0.49
PDGFB-201ENST00000331163 SCG2P13521 617 aa18.14■□□□□ 0.49
PDGFB-201ENST00000331163 HOXA13P31271 388 aaPredicted RBP18.14■□□□□ 0.49
PDGFB-201ENST00000331163 SMAP1Q8IYB5 467 aaPredicted RBP18.14■□□□□ 0.49
PDGFB-201ENST00000331163 CLSTN1O94985 981 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 INPP5BP32019 993 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 NSMFQ6X4W1 530 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 ZDHHC15Q96MV8 337 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 FBXO28Q9NVF7 368 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 TERF1P54274 439 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
PDGFB-201ENST00000331163 IFNAR1P17181 557 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 GNAQP50148 359 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 FAM83BQ5T0W9 1011 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
PDGFB-201ENST00000331163 KCNB2Q92953 911 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 ARHGEF10LQ9HCE6 1279 aa18.13■□□□□ 0.49
PDGFB-201ENST00000331163 F5H6K3 240 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 NR1I2O75469 434 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 KLRC3Q07444 240 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 ANO1Q5XXA6 986 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 DHX58Q96C10 678 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 RBM28Q9NW13 759 aaKnown RBP18.12■□□□□ 0.49
PDGFB-201ENST00000331163 ZHX2Q9Y6X8 837 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 FLOT1O75955 427 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 KRT26Q7Z3Y9 468 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 JMYQ8N9B5 988 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 PAGR1Q9BTK6 254 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 MTMR4Q9NYA4 1195 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 ZNF541Q9H0D2 1346 aa18.12■□□□□ 0.49
PDGFB-201ENST00000331163 NHSQ6T4R5 1651 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 TROAPQ12815 778 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 TNFAIP1Q13829 316 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 MOB2Q70IA6 237 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 TRPM4Q8TD43 1214 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
PDGFB-201ENST00000331163 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
PDGFB-201ENST00000331163 SERPINA10Q9UK55 444 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 PCDHB6Q9Y5E3 794 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 PCDHA1Q9Y5I3 950 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 CCNT1O60563 726 aaKnown RBP18.11■□□□□ 0.49
PDGFB-201ENST00000331163 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L15C9J2P7 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L13C9JLJ4 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L11C9JVI0 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L18D6R9N7 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L22D6RA61 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L17D6RBQ6 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L19D6RCP7 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L20D6RJB6 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
PDGFB-201ENST00000331163 LMNB1P20700 586 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 KIF23Q02241 960 aaPredicted RBP18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L24Q0WX57 530 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 USP17L6PQ6QN14 398 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 C16orf86Q6ZW13 317 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 C7orf43Q8WVR3 580 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 GJA10Q969M2 543 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 KANSL2Q9H9L4 492 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 TMEM260Q9NX78 707 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 PCNTO95613 3336 aa18.11■□□□□ 0.49
PDGFB-201ENST00000331163 FMNL1O95466 1100 aaPredicted RBP18.1■□□□□ 0.49
PDGFB-201ENST00000331163 ALAS1P13196 640 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 TXKP42681 527 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 TMTC3Q6ZXV5 915 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 NOSTRINQ8IVI9 506 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 NEDD1Q8NHV4 660 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 ZBTB21Q9ULJ3 1066 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 NUP188Q5SRE5 1749 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 GOLGA6L19H0YKK7 550 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 RAD51AP2Q09MP3 1159 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 CLEC17AQ6ZS10 378 aa18.1■□□□□ 0.49
PDGFB-201ENST00000331163 PAPPAQ13219 1627 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 DDX39AO00148 427 aaKnown RBP18.09■□□□□ 0.49
PDGFB-201ENST00000331163 CHMP2AO43633 222 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 ORC4O43929 436 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 SGMS1Q86VZ5 419 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 CERS3Q8IU89 383 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 CNNM3Q8NE01 707 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 MYRIPQ8NFW9 859 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.49
PDGFB-201ENST00000331163 SHMT1P34896 483 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 RESTQ13127 1097 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 SEC23AQ15436 765 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 SBK1Q52WX2 424 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 DGKHQ86XP1 1220 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 PDCL2Q8N4E4 241 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 C6orf50Q9HD87 102 aa18.09■□□□□ 0.49
PDGFB-201ENST00000331163 FAM217BQ9NTX9 383 aaPredicted RBP18.09■□□□□ 0.49
PDGFB-201ENST00000331163 MAP1SQ66K74 1059 aaPredicted RBP18.08■□□□□ 0.49
PDGFB-201ENST00000331163 FOXP4Q8IVH2 680 aaPredicted RBP18.08■□□□□ 0.49
PDGFB-201ENST00000331163 ADM5C9JUS6 153 aa18.08■□□□□ 0.49
PDGFB-201ENST00000331163 ZNF771Q7L3S4 317 aaPredicted RBP18.08■□□□□ 0.49
PDGFB-201ENST00000331163 MAPK8IP1Q9UQF2 711 aa18.08■□□□□ 0.49
PDGFB-201ENST00000331163 ERCC3P19447 782 aa18.08■□□□□ 0.48
PDGFB-201ENST00000331163 SYKP43405 635 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms