RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 ZMYND8Q9ULU4 1186 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-201ENST00000327154 PFASO15067 1338 aa16.88■□□□□ 0.29
RPAIN-201ENST00000327154 VWA5AO00534 786 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 PRDM1O75626 825 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 MX1P20591 662 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 OLFML2BQ68BL8 750 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 ZNF444Q8N0Y2 327 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-201ENST00000327154 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-201ENST00000327154 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 SLC5A4Q9NY91 659 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 NYAP2Q9P242 653 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 CLIP2Q9UDT6 1046 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 TRIOBPQ9H2D6 2365 aa16.87■□□□□ 0.29
RPAIN-201ENST00000327154 F5H6K3 240 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 SLC25A27O95847 323 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 FCER1AP12319 257 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 SYN1P17600 705 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 KLRC3Q07444 240 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 ABRAQ8N0Z2 381 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 NACAP1Q9BZK3 213 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
RPAIN-201ENST00000327154 PPP1R9AQ9ULJ8 1098 aa16.86■□□□□ 0.29
RPAIN-201ENST00000327154 MSCO60682 206 aa16.85■□□□□ 0.29
RPAIN-201ENST00000327154 CYBAP13498 195 aa16.85■□□□□ 0.29
RPAIN-201ENST00000327154 STAT3P40763 770 aa16.85■□□□□ 0.29
RPAIN-201ENST00000327154 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
RPAIN-201ENST00000327154 PRAMEF19Q5SWL8 479 aa16.85■□□□□ 0.29
RPAIN-201ENST00000327154 SENP6Q9GZR1 1112 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-201ENST00000327154 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
RPAIN-201ENST00000327154 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 NDUFB10O96000 172 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 LRRC26Q2I0M4 334 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 RIOX2Q8IUF8 465 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 MMP19Q99542 508 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 GDF15Q99988 308 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 MYH7P12883 1935 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 RLFQ13129 1914 aa16.84■□□□□ 0.29
RPAIN-201ENST00000327154 PGK2P07205 417 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 ANO1Q5XXA6 986 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 REPS2Q8NFH8 660 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 MKL1Q969V6 931 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 MAML3Q96JK9 1138 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 SLF1Q9BQI6 1058 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 NAPBQ9H115 298 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
RPAIN-201ENST00000327154 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
RPAIN-201ENST00000327154 RANBP2P49792 3224 aaKnown RBP16.83■□□□□ 0.28
RPAIN-201ENST00000327154 A0A1W2PPC1 479 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 BMP8BP34820 402 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 PDE4BQ07343 736 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 PPARAQ07869 468 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
RPAIN-201ENST00000327154 KCTD2Q14681 263 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 GJC2Q5T442 439 aaPredicted RBP16.82■□□□□ 0.28
RPAIN-201ENST00000327154 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
RPAIN-201ENST00000327154 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
RPAIN-201ENST00000327154 DNM1LO00429 736 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 SEPT4O43236 478 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 TTLL1O95922 423 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-201ENST00000327154 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
RPAIN-201ENST00000327154 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-201ENST00000327154 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-201ENST00000327154 TFAP4Q01664 338 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 NEDD1Q8NHV4 660 aa16.81■□□□□ 0.28
RPAIN-201ENST00000327154 MYH8P13535 1937 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 COPB2P35606 906 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 PDE1AP54750 535 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 ZNF792Q3KQV3 632 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 CPXCR1Q8N123 301 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 LRRC47Q8N1G4 583 aaKnown RBP16.8■□□□□ 0.28
RPAIN-201ENST00000327154 KIFC2Q96AC6 838 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 TEX13BQ9BXU2 312 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
RPAIN-201ENST00000327154 A0A0G2JMZ2 1700 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 ALPK3Q96L96 1907 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 SOX1O00570 391 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-201ENST00000327154 FOXP2O15409 715 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 ZBED4O75132 1171 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 SNRNP48Q6IEG0 339 aaKnown RBP16.79■□□□□ 0.28
RPAIN-201ENST00000327154 GMCL1P1Q8NEA9 526 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 TINF2Q9BSI4 451 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 FEM1BQ9UK73 627 aa16.79■□□□□ 0.28
RPAIN-201ENST00000327154 DIS3Q9Y2L1 958 aaKnown RBP16.79■□□□□ 0.28
RPAIN-201ENST00000327154 CTDP1Q9Y5B0 961 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-201ENST00000327154 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
RPAIN-201ENST00000327154 VPS53Q5VIR6 699 aa16.78■□□□□ 0.28
RPAIN-201ENST00000327154 SLFN13Q68D06 897 aa16.78■□□□□ 0.28
RPAIN-201ENST00000327154 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms