RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.22
SSBP3-201ENST00000326956 FAM204AQ9H8W3 233 aa16.46■□□□□ 0.22
SSBP3-201ENST00000326956 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.22
SSBP3-201ENST00000326956 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
SSBP3-201ENST00000326956 LRRC10BA6NIK2 292 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 FGFR2P21802 821 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 EVA1CP58658 441 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 MYH8P13535 1937 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 WDR93Q6P2C0 686 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 SDR42E1Q8WUS8 393 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 CHP1Q99653 195 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 SAR1BQ9Y6B6 198 aa16.45■□□□□ 0.22
SSBP3-201ENST00000326956 ENC1O14682 589 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 NLRP5P59047 1200 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-201ENST00000326956 MAGEC2Q9UBF1 373 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-201ENST00000326956 XDHP47989 1333 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 LRRIQ3A6PVS8 624 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-201ENST00000326956 MCM7P33993 719 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 BCAMP50895 628 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
SSBP3-201ENST00000326956 PKN1Q16512 942 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-201ENST00000326956 EHBP1Q8NDI1 1231 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 CRACR2AQ9BSW2 395 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 CHD4Q14839 1912 aa16.44■□□□□ 0.22
SSBP3-201ENST00000326956 LRP6O75581 1613 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 RNF225M0QZC1 329 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-201ENST00000326956 RNF40O75150 1001 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 PLEKHA8P1O95397 391 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 CALM1P0DP23 149 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 CALM2P0DP24 149 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 CALM3P0DP25 149 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 KRT83P78385 493 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 ATP2C1P98194 919 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-201ENST00000326956 CCDC70Q6NSX1 233 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 CAPZA3Q96KX2 299 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 ZNHIT6Q9NWK9 470 aaKnown RBP16.43■□□□□ 0.22
SSBP3-201ENST00000326956 TNS2Q63HR2 1409 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 H7C1D1 291 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 KRT86O43790 486 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 RPN1P04843 607 aaKnown RBP16.43■□□□□ 0.22
SSBP3-201ENST00000326956 AMPD2Q01433 879 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 STIM1Q13586 685 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 PIK3AP1Q6ZUJ8 805 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 TRIM10Q9UDY6 481 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
SSBP3-201ENST00000326956 MAGEB6P1A0A0J9YX57 407 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 USP14P54578 494 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 SEC23AQ15436 765 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 ENAHQ8N8S7 591 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-201ENST00000326956 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-201ENST00000326956 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
SSBP3-201ENST00000326956 STAT6P42226 847 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
SSBP3-201ENST00000326956 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 VIPAS39Q9H9C1 493 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 HDAC6Q9UBN7 1215 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-201ENST00000326956 TTC26A0AVF1 554 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 WNT7AO00755 349 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 RPS6KA5O75582 802 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 TRAPPC11Q7Z392 1133 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 RPGRIP1Q96KN7 1286 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 PCMTD1Q96MG8 357 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-201ENST00000326956 GDAQ9Y2T3 454 aa16.42■□□□□ 0.22
SSBP3-201ENST00000326956 MYH6P13533 1939 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 PSMD14O00487 310 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 CYLC1P35663 651 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-201ENST00000326956 PIGBQ92521 554 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 IGHMBP2P38935 993 aaKnown RBP16.41■□□□□ 0.22
SSBP3-201ENST00000326956 PRCPP42785 496 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
SSBP3-201ENST00000326956 MB21D1Q8N884 522 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
SSBP3-201ENST00000326956 E2F4Q16254 413 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 SKIDA1Q1XH10 827 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 IQCEQ6IPM2 695 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 PDXDC2PQ6P474 469 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 JAKMIP2Q96AA8 810 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 SOS2Q07890 1332 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-201ENST00000326956 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
SSBP3-201ENST00000326956 TRAPPC10P48553 1259 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 FOXR1Q6PIV2 292 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
SSBP3-201ENST00000326956 GNL3LQ9NVN8 582 aaKnown RBP16.4■□□□□ 0.22
SSBP3-201ENST00000326956 SRGAP2O75044 1071 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 TRIM21P19474 475 aaKnown RBP16.39■□□□□ 0.21
SSBP3-201ENST00000326956 LRRC31Q6UY01 552 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 EFCC1Q9HA90 598 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms