RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 COL1A1P02452 1464 aaPredicted RBP22.54■■□□□ 1.2
SOX2-201ENST00000325404 A0A1B0GUL6 1792 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 PLEKHA8P1O95397 391 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 PPP2R3AQ06190 1150 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 JAKMIP3Q5VZ66 844 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 CNGA4Q8IV77 575 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 ADGRG1Q9Y653 693 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 CNTNAP5Q8WYK1 1306 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 E2F4Q16254 413 aa22.53■■□□□ 1.2
SOX2-201ENST00000325404 CTR9Q6PD62 1173 aa22.53■■□□□ 1.2
SOX2-201ENST00000325404 TEX33O43247 280 aa22.53■■□□□ 1.2
SOX2-201ENST00000325404 AFMP43652 599 aa22.53■■□□□ 1.2
SOX2-201ENST00000325404 SPAG1Q07617 926 aa22.53■■□□□ 1.2
SOX2-201ENST00000325404 LIMA1Q9UHB6 759 aaKnown RBP22.53■■□□□ 1.2
SOX2-201ENST00000325404 HMGB2P26583 209 aaKnown RBP22.52■■□□□ 1.2
SOX2-201ENST00000325404 GYG1P46976 350 aa22.52■■□□□ 1.2
SOX2-201ENST00000325404 RASGRP2Q7LDG7 609 aa22.52■■□□□ 1.2
SOX2-201ENST00000325404 CNBD1Q8NA66 436 aa22.52■■□□□ 1.2
SOX2-201ENST00000325404 IQSEC3Q9UPP2 1182 aaPredicted RBP22.52■■□□□ 1.2
SOX2-201ENST00000325404 TAF1P21675 1872 aa22.52■■□□□ 1.2
SOX2-201ENST00000325404 MFAP3LO75121 409 aa22.52■■□□□ 1.19
SOX2-201ENST00000325404 RBL2Q08999 1139 aa22.52■■□□□ 1.19
SOX2-201ENST00000325404 ARL6IP4Q66PJ3 421 aaKnown RBP22.52■■□□□ 1.19
SOX2-201ENST00000325404 CTCFLQ8NI51 663 aaPredicted RBP22.52■■□□□ 1.19
SOX2-201ENST00000325404 UBR3Q6ZT12 1888 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 MYH2Q9UKX2 1941 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 GTPBP6O43824 516 aaPredicted RBP22.51■■□□□ 1.19
SOX2-201ENST00000325404 PLA2G4AP47712 749 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 PTGDRQ13258 359 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 FBXO33Q7Z6M2 555 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 UBXN6Q9BZV1 441 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 RWDD2AQ9UIY3 292 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 EP400Q96L91 3159 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 IGSF3O75054 1194 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 PRDM1O75626 825 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 ZNF174Q15697 407 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 GOLGA1Q92805 767 aa22.51■■□□□ 1.19
SOX2-201ENST00000325404 FAM84BQ96KN1 310 aaPredicted RBP22.51■■□□□ 1.19
SOX2-201ENST00000325404 DYNLL1P63167 89 aaKnown RBP22.5■■□□□ 1.19
SOX2-201ENST00000325404 SEMA3FQ13275 785 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 TRIM14Q14142 442 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 SBK1Q52WX2 424 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 FAM177A1Q8N128 213 aaPredicted RBP22.5■■□□□ 1.19
SOX2-201ENST00000325404 MRPL44Q9H9J2 332 aaKnown RBP22.5■■□□□ 1.19
SOX2-201ENST00000325404 ATP8A2Q9NTI2 1148 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 RMND1Q9NWS8 449 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 SCG2P13521 617 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 GYS1P13807 737 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 PFKFB3Q16875 520 aaPredicted RBP22.5■■□□□ 1.19
SOX2-201ENST00000325404 TXNRD1Q16881 649 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 PDXDC2PQ6P474 469 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 ANKRD2Q9GZV1 360 aa22.5■■□□□ 1.19
SOX2-201ENST00000325404 RAD9BQ6WBX8 426 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 SRBD1Q8N5C6 995 aaKnown RBP22.49■■□□□ 1.19
SOX2-201ENST00000325404 ZNF384Q8TF68 577 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 TTF2Q9UNY4 1162 aaKnown RBP22.49■■□□□ 1.19
SOX2-201ENST00000325404 XDHP47989 1333 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 SOWAHDA6NJG2 315 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 CALML3P27482 149 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 TM4SF1P30408 202 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 CC2D1AQ6P1N0 951 aaPredicted RBP22.49■■□□□ 1.19
SOX2-201ENST00000325404 TMTC1Q8IUR5 882 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 NSUN4Q96CB9 384 aaKnown RBP22.49■■□□□ 1.19
SOX2-201ENST00000325404 DESI2Q9BSY9 194 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 SH3GLB2Q9NR46 395 aa22.49■■□□□ 1.19
SOX2-201ENST00000325404 USP17L12C9JPN9 530 aa22.48■■□□□ 1.19
SOX2-201ENST00000325404 USP17L21D6R901 530 aa22.48■■□□□ 1.19
SOX2-201ENST00000325404 WNT7AO00755 349 aa22.48■■□□□ 1.19
SOX2-201ENST00000325404 KIF5CO60282 957 aa22.48■■□□□ 1.19
SOX2-201ENST00000325404 LONP1P36776 959 aaKnown RBP22.48■■□□□ 1.19
SOX2-201ENST00000325404 KLHL10Q6JEL2 608 aa22.48■■□□□ 1.19
SOX2-201ENST00000325404 CCDC12Q8WUD4 166 aaPredicted RBP22.48■■□□□ 1.19
SOX2-201ENST00000325404 CRNKL1Q9BZJ0 848 aaKnown RBP22.48■■□□□ 1.19
SOX2-201ENST00000325404 SMIM22K7EJ46 135 aa22.48■■□□□ 1.19
SOX2-201ENST00000325404 ARPP21Q9UBL0 812 aaPredicted RBP22.48■■□□□ 1.19
SOX2-201ENST00000325404 CYP2D7A0A087X1C5 515 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 STX17P56962 302 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 ANKRD20A12PQ8NF67 263 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 MYO1AQ9UBC5 1043 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 TNRC6CQ9HCJ0 1690 aaKnown RBP22.47■■□□□ 1.19
SOX2-201ENST00000325404 WTIPA6NIX2 430 aaPredicted RBP22.47■■□□□ 1.19
SOX2-201ENST00000325404 KIF5BP33176 963 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 TXLNAP40222 546 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 MTF1Q14872 753 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 ZNF658Q5TYW1 1059 aaPredicted RBP22.47■■□□□ 1.19
SOX2-201ENST00000325404 PRR5LQ6MZQ0 368 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 CEP112Q8N8E3 955 aa22.47■■□□□ 1.19
SOX2-201ENST00000325404 BAZ2AQ9UIF9 1905 aaKnown RBP22.46■■□□□ 1.19
SOX2-201ENST00000325404 POTEB2H3BUK9 544 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 GYPCP04921 128 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 NLRP5P59047 1200 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 BRD3Q15059 726 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 SRGAP1Q7Z6B7 1085 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 PROM2Q8N271 834 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 ARFGAP3Q9NP61 516 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 DCP1AQ9NPI6 582 aaPredicted RBP22.46■■□□□ 1.19
SOX2-201ENST00000325404 CDC23Q9UJX2 597 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 LAMB1P07942 1786 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 hCG_1642624A0A1W2PR95 340 aa22.46■■□□□ 1.19
SOX2-201ENST00000325404 CCDC66A2RUB6 948 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms