RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TCEAL5Q5H9L2 206 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 SHCBP1Q8NEM2 672 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 DDX1Q92499 740 aaKnown RBP8.4□□□□□ -1.06
CSTF3-201ENST00000323959 VWCEQ96DN2 955 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 WNT8AQ9H1J5 351 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 CLDND1Q9NY35 253 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 TANC1Q9C0D5 1861 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 PTPRSQ13332 1948 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 LTBRP36941 435 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 ANGPT1Q15389 498 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 GINM1Q9NU53 330 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 HYPKQ9NX55 129 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 FAM198AQ9UFP1 575 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 CHD7Q9P2D1 2997 aa8.4□□□□□ -1.07
CSTF3-201ENST00000323959 PGK1P00558 417 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 HNRNPABQ99729 332 aaKnown RBP8.39□□□□□ -1.07
CSTF3-201ENST00000323959 LMAN2LQ9H0V9 348 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 UPF3AQ9H1J1 476 aaKnown RBP8.39□□□□□ -1.07
CSTF3-201ENST00000323959 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 CACNA2D2Q9NY47 1150 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 RFX7Q2KHR2 1363 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 C5orf42Q9H799 3197 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 GCN1Q92616 2671 aaKnown RBP8.39□□□□□ -1.07
CSTF3-201ENST00000323959 SYNRGQ9UMZ2 1314 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 CABYRO75952 493 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 PPP2R1AP30153 589 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 HIBADHP31937 336 aaKnown RBP8.39□□□□□ -1.07
CSTF3-201ENST00000323959 KCNA10Q16322 511 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 PLA2G12BQ9BX93 195 aa8.39□□□□□ -1.07
CSTF3-201ENST00000323959 FANCMQ8IYD8 2048 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
CSTF3-201ENST00000323959 SLC30A4O14863 429 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 HOXB7P09629 217 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 NKX3-2P78367 333 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 CDC42EP5Q6NZY7 148 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 DTWD2Q8NBA8 298 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 SECISBP2LQ93073 1101 aaKnown RBP8.38□□□□□ -1.07
CSTF3-201ENST00000323959 AGBL1Q96MI9 1066 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 IDI2Q9BXS1 227 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 PDGFBP01127 241 aaPredicted RBP8.38□□□□□ -1.07
CSTF3-201ENST00000323959 ATF7P17544 494 aaPredicted RBP8.38□□□□□ -1.07
CSTF3-201ENST00000323959 KCNJ6P48051 423 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 BACE1P56817 501 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 TCP10Q12799 353 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 SOWAHCQ53LP3 525 aaPredicted RBP8.38□□□□□ -1.07
CSTF3-201ENST00000323959 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 RAD9AQ99638 391 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 RTP3Q9BQQ7 232 aa8.38□□□□□ -1.07
CSTF3-201ENST00000323959 PHF7Q9BWX1 381 aaPredicted RBP8.38□□□□□ -1.07
CSTF3-201ENST00000323959 WDFY4Q6ZS81 3184 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 DCDC2BA2VCK2 349 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 LINC01553A4QN01 128 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 ADORA2AP29274 412 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 CCL23P55773 120 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 NETO1Q8TDF5 533 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 TSPYL4Q9UJ04 414 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 CCDC184Q52MB2 194 aa8.37□□□□□ -1.07
CSTF3-201ENST00000323959 UMODL1Q5DID0 1318 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 RING1Q06587 406 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 UBE4AQ14139 1066 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 GRIK5Q16478 980 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 WDR78Q5VTH9 848 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 ERICH6BQ5W0A0 696 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 MAML3Q96JK9 1138 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 SIL1Q9H173 461 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 SPC25Q9HBM1 224 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 DUSP11O75319 330 aaKnown RBP8.36□□□□□ -1.07
CSTF3-201ENST00000323959 NTRK1P04629 796 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 ITGA6P23229 1130 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 UNQ6494/PRO21346Q6UXR6 183 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 CRIPAKQ8N1N5 446 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 CHPF2Q9P2E5 772 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
CSTF3-201ENST00000323959 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
CSTF3-201ENST00000323959 LCHNA4D1U4 455 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 NFIAQ12857 509 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 COASYQ13057 564 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 PRAMEF19Q5SWL8 479 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 EP400NLQ6ZTU2 488 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 MSL3Q8N5Y2 521 aaKnown RBP8.35□□□□□ -1.07
CSTF3-201ENST00000323959 NCDNQ9UBB6 729 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L15C9J2P7 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L13C9JLJ4 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L11C9JVI0 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L18D6R9N7 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L22D6RA61 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L17D6RBQ6 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L19D6RCP7 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L20D6RJB6 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 PEX10O60683 326 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 EFCAB14O75071 495 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 ZNF865P0CJ78 1059 aaPredicted RBP8.35□□□□□ -1.07
CSTF3-201ENST00000323959 ZNF200P98182 395 aaPredicted RBP8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L24Q0WX57 530 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms