RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PPM1FP49593 454 aaPredicted RBP12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 PANK4Q9NVE7 773 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 LTKP29376 864 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 LONRF2Q1L5Z9 754 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 MYOCDQ8IZQ8 938 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 USP40Q9NVE5 1235 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 INPP5BP32019 993 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GYG1P46976 350 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 MRRFQ96E11 262 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 MYO1AQ9UBC5 1043 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GJA3Q9Y6H8 435 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 A0A1W2PQ27 194 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 A0A1W2PQ64 194 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 A0A1W2PQD8 194 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 CHRNDQ07001 517 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PPFIA1Q13136 1202 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PPP1R21Q6ZMI0 780 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 ASIC3Q9UHC3 531 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 USP6P35125 1406 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 LRMPQ12912 555 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 USTQ9Y2C2 406 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 EFCAB8A8MWE9 144 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 CEP85LQ5SZL2 805 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 SPATA1Q5VX52 437 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 OR8K1Q8NGG5 319 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 MAIP1Q8WWC4 291 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 ATP10DQ9P241 1426 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 H0YIN7 160 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 CFBP00751 764 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 LONP1P36776 959 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 UBE3CQ15386 1083 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GBP6Q6ZN66 633 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GAS2L3Q86XJ1 694 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 STMN2Q93045 179 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 FANCLQ9NW38 375 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 HYOU1Q9Y4L1 999 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GOLGA8KD6RF30 607 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 CD2BP2O95400 341 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 GBP1P32455 592 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PSMC4P43686 418 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 U2AF1L4Q8WU68 220 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.489e-7■■■□□ 16.7
SNRNP200-201ENST00000323853 STIM2Q9P246 746 aa12.07□□□□□ -0.48
SNRNP200-201ENST00000323853 CCDC160A6NGH7 325 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 CCDC105Q8IYK2 499 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 NLRC4Q9NPP4 1024 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 H7C1D1 291 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 ADORA1P30542 326 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 DNM2P50570 870 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 RAB17Q9H0T7 212 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 SNX16P57768 344 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 ARHGAP44Q17R89 818 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 NEK8Q86SG6 692 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 PYCARDQ9ULZ3 195 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 STK10O94804 968 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 ZNF853P0CG23 659 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 GREM2Q9H772 168 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 DBNLQ9UJU6 430 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 SLC8A3P57103 927 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 ITIH3Q06033 890 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
SNRNP200-201ENST00000323853 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 DENND2CQ68D51 928 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 RABEP2Q9H5N1 569 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 PSTPIP2Q9H939 334 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 MAP3K4Q9Y6R4 1608 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 PPFIBP2Q8ND30 876 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 XRCC5P13010 732 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 RASA3Q14644 834 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 NSUN7Q8NE18 718 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms