RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TMEM232C9JQI7 657 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 BBOX1O75936 387 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 RHOXF2BP0C7M4 288 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PDE6BP35913 854 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 TNIP1Q15025 636 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 MTERF4Q7Z6M4 381 aaKnown RBP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 IGDCC4Q8TDY8 1250 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 SLF1Q9BQI6 1058 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 RHOXF2Q9BQY4 288 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 FER1L4A9Z1Z3 1794 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 CCDC175P0C221 793 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 ICA1Q05084 483 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 GRIN1Q05586 938 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 TRERF1Q96PN7 1200 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 AKR1B15C9JRZ8 316 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-201ENST00000321105 KIF2AO00139 706 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-201ENST00000321105 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-201ENST00000321105 PLCD1P51178 756 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 LRRC41Q15345 812 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 PLA2G12BQ9BX93 195 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 NLRC4Q9NPP4 1024 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 NCOA3Q9Y6Q9 1424 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 SPATA31A5Q5VU36 1347 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 SPATA31A7Q8IWB4 1347 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 CEP95Q96GE4 821 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
TOP3A-201ENST00000321105 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 PHACTR2O75167 634 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■■□□□ 13
TOP3A-201ENST00000321105 SPAG1Q07617 926 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 RAPGEF1Q13905 1077 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 CLEC17AQ6ZS10 378 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 EN1Q05925 392 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-201ENST00000321105 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 CARD6Q9BX69 1037 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 FOXP1Q9H334 677 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-201ENST00000321105 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.35□□□□□ -0.43
TOP3A-201ENST00000321105 HPS5Q9UPZ3 1129 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 PYM1Q9BRP8 204 aaKnown RBP12.35□□□□□ -0.43
TOP3A-201ENST00000321105 ZNF408Q9H9D4 720 aa12.35□□□□□ -0.43
TOP3A-201ENST00000321105 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 EVX2Q03828 476 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 ELF2Q15723 593 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 SHC4Q6S5L8 630 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 NEK8Q86SG6 692 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 PCDHA12Q9UN75 941 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 MEIS1O00470 390 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 RXRBP28702 533 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 FMR1NBQ8N0W7 255 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 SRBD1Q8N5C6 995 aaKnown RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
TOP3A-201ENST00000321105 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.34□□□□□ -0.437e-6■■■■□ 21
TOP3A-201ENST00000321105 FGFR1OPO95684 399 aaKnown RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 TDRD7Q8NHU6 1098 aaKnown RBP12.34□□□□□ -0.43
TOP3A-201ENST00000321105 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.43
TOP3A-201ENST00000321105 DDAH1O94760 285 aa12.33□□□□□ -0.43
TOP3A-201ENST00000321105 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.43
TOP3A-201ENST00000321105 RASGRP2Q7LDG7 609 aa12.33□□□□□ -0.43
TOP3A-201ENST00000321105 ANKRD13CQ8N6S4 541 aa12.33□□□□□ -0.43
TOP3A-201ENST00000321105 GDAP1L1Q96MZ0 367 aa12.33□□□□□ -0.43
TOP3A-201ENST00000321105 GDAQ9Y2T3 454 aa12.33□□□□□ -0.43
TOP3A-201ENST00000321105 USP17L15C9J2P7 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L13C9JLJ4 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L11C9JVI0 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L18D6R9N7 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L22D6RA61 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L17D6RBQ6 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L19D6RCP7 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L20D6RJB6 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 HARSP12081 509 aaKnown RBP12.33□□□□□ -0.44
TOP3A-201ENST00000321105 POLD1P28340 1107 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms