RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 ANKIB1Q9P2G1 1089 aa23.54■■□□□ 1.36
CPNE7-202ENST00000319518 PRPF3O43395 683 aaKnown RBP23.53■■□□□ 1.36
CPNE7-202ENST00000319518 COBLO75128 1261 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 TPM1P09493 284 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 CPLX3Q8WVH0 158 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 STAMQ92783 540 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 DUOX1Q9NRD9 1551 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 TROAPQ12815 778 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 CCDC12Q8WUD4 166 aaPredicted RBP23.53■■□□□ 1.36
CPNE7-202ENST00000319518 PARD6BQ9BYG5 372 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 LZTFL1Q9NQ48 299 aa23.53■■□□□ 1.36
CPNE7-202ENST00000319518 MYH13Q9UKX3 1938 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 CCDC175P0C221 793 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 ZNF174Q15697 407 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 SLC4A8Q2Y0W8 1093 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 QTRT2Q9H974 415 aaKnown RBP23.52■■□□□ 1.36
CPNE7-202ENST00000319518 ERICH4A6NGS2 130 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 AKAP17AQ02040 695 aaKnown RBP23.52■■□□□ 1.36
CPNE7-202ENST00000319518 PPP2R5BQ15173 497 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 CT47A1Q5JQC4 288 aaPredicted RBP23.52■■□□□ 1.36
CPNE7-202ENST00000319518 PRR5LQ6MZQ0 368 aa23.52■■□□□ 1.36
CPNE7-202ENST00000319518 ADAMTS3O15072 1205 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 GSDMAQ96QA5 445 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 XDHP47989 1333 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 IRS2Q9Y4H2 1338 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 MFAP3LO75121 409 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 GYPCP04921 128 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 CYP2C19P33261 490 aa23.51■■□□□ 1.35
CPNE7-202ENST00000319518 USP17L12C9JPN9 530 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 USP17L21D6R901 530 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 SEMA3EO15041 775 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 FXR1P51114 621 aaKnown RBP eCLIP23.5■■□□□ 1.35
CPNE7-202ENST00000319518 GRAPQ13588 217 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 IFIT1BQ5T764 474 aaKnown RBP23.5■■□□□ 1.35
CPNE7-202ENST00000319518 CTR9Q6PD62 1173 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
CPNE7-202ENST00000319518 FERMT2Q96AC1 680 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 MTRQ99707 1265 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 TRIM37O94972 964 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 XBP1P17861 261 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 CASP14P31944 242 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 FAM193AP78312 1265 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 E2F4Q16254 413 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 RABGGTAQ92696 567 aa23.5■■□□□ 1.35
CPNE7-202ENST00000319518 ATP8B1O43520 1251 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 GYS1P13807 737 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 VEGFAP15692 232 aaPredicted RBP23.49■■□□□ 1.35
CPNE7-202ENST00000319518 ABL1P00519 1130 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 CYP2D6P10635 497 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 PTGDRQ13258 359 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 IL17AQ16552 155 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 PPFIBP1Q86W92 1011 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 BLZF1Q9H2G9 400 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 ZSWIM4Q9H7M6 989 aa23.49■■□□□ 1.35
CPNE7-202ENST00000319518 BAZ2BQ9UIF8 2168 aaKnown RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 RNF225M0QZC1 329 aaPredicted RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 POLR3GO15318 223 aaPredicted RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 FGRP09769 529 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 ATP2C1P98194 919 aaPredicted RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 GRIK5Q16478 980 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 TTC38Q5R3I4 469 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 TMTC3Q6ZXV5 915 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 RASGRP2Q7LDG7 609 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 CATIPQ7Z7H3 387 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 NAA15Q9BXJ9 866 aaKnown RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 ZCCHC17Q9NP64 241 aaKnown RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 CTNND2Q9UQB3 1225 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 CNTNAP5Q8WYK1 1306 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 CREBRFQ8IUR6 639 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 SRBD1Q8N5C6 995 aaKnown RBP23.48■■□□□ 1.35
CPNE7-202ENST00000319518 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 FUT8Q9BYC5 575 aa23.48■■□□□ 1.35
CPNE7-202ENST00000319518 NMT2O60551 498 aa23.47■■□□□ 1.35
CPNE7-202ENST00000319518 TFRCP02786 760 aaKnown RBP23.47■■□□□ 1.35
CPNE7-202ENST00000319518 FECHP22830 423 aa23.47■■□□□ 1.35
CPNE7-202ENST00000319518 GOLGA1Q92805 767 aa23.47■■□□□ 1.35
CPNE7-202ENST00000319518 CCT6AP40227 531 aaKnown RBP23.47■■□□□ 1.35
CPNE7-202ENST00000319518 PDXDC2PQ6P474 469 aa23.47■■□□□ 1.35
CPNE7-202ENST00000319518 CCDC34Q96HJ3 373 aa23.47■■□□□ 1.35
CPNE7-202ENST00000319518 CDC25AP30304 524 aa23.46■■□□□ 1.35
CPNE7-202ENST00000319518 TXLNAP40222 546 aa23.46■■□□□ 1.35
CPNE7-202ENST00000319518 KRT31Q15323 416 aa23.46■■□□□ 1.35
CPNE7-202ENST00000319518 TAF3Q5VWG9 929 aa23.46■■□□□ 1.35
CPNE7-202ENST00000319518 CTAGE1Q96RT6 745 aa23.46■■□□□ 1.35
CPNE7-202ENST00000319518 DCP1AQ9NPI6 582 aaPredicted RBP23.46■■□□□ 1.35
CPNE7-202ENST00000319518 RBM28Q9NW13 759 aaKnown RBP23.46■■□□□ 1.35
CPNE7-202ENST00000319518 DLEC1Q9Y238 1755 aa23.46■■□□□ 1.35
CPNE7-202ENST00000319518 ERVK-24P63145 666 aa23.45■■□□□ 1.35
CPNE7-202ENST00000319518 ACRBPQ8NEB7 543 aa23.45■■□□□ 1.35
CPNE7-202ENST00000319518 BMP15O95972 392 aa23.45■■□□□ 1.34
CPNE7-202ENST00000319518 SERPINB2P05120 415 aa23.45■■□□□ 1.34
CPNE7-202ENST00000319518 GPSM2P81274 684 aa23.45■■□□□ 1.34
CPNE7-202ENST00000319518 DZIP1Q86YF9 867 aaKnown RBP23.45■■□□□ 1.34
CPNE7-202ENST00000319518 RPGRQ92834 1020 aaKnown RBP23.45■■□□□ 1.34
CPNE7-202ENST00000319518 ARFGAP3Q9NP61 516 aa23.45■■□□□ 1.34
CPNE7-202ENST00000319518 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.34
CPNE7-202ENST00000319518 ITIH6Q6UXX5 1313 aa23.44■■□□□ 1.34
CPNE7-202ENST00000319518 OAS2P29728 719 aaKnown RBP23.44■■□□□ 1.34
CPNE7-202ENST00000319518 SRGAP1Q7Z6B7 1085 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms