RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 NUP88Q99567 741 aaPredicted RBP20.42■□□□□ 0.86
LTBP4-204ENST00000318809 SMC3Q9UQE7 1217 aa20.42■□□□□ 0.86
LTBP4-204ENST00000318809 PALM3A6NDB9 673 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-204ENST00000318809 PPIL2Q13356 520 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 CMTR1Q8N1G2 835 aaKnown RBP20.41■□□□□ 0.86
LTBP4-204ENST00000318809 CTCFLQ8NI51 663 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-204ENST00000318809 GBP4Q96PP9 640 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 GOPCQ9HD26 462 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 FRMPD2Q68DX3 1309 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-204ENST00000318809 PLEKHA8P1O95397 391 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 CTDNEP1O95476 244 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 HMGCS2P54868 508 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 ZNF543Q08ER8 600 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 KCTD1Q719H9 257 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 GMCL1Q96IK5 515 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 TLL2Q9Y6L7 1015 aa20.41■□□□□ 0.86
LTBP4-204ENST00000318809 TMEM88BA6NKF7 163 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
LTBP4-204ENST00000318809 PDIA4P13667 645 aaKnown RBP20.4■□□□□ 0.86
LTBP4-204ENST00000318809 SLC1A4P43007 532 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 NTRK3Q16288 839 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 SLC35G1Q2M3R5 365 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 NBPF11Q86T75 865 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 DCAF4Q8WV16 495 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 WNK4Q96J92 1243 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 CPVLQ9H3G5 476 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 GPCPD1Q9NPB8 672 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 KCNH4Q9UQ05 1017 aa20.4■□□□□ 0.86
LTBP4-204ENST00000318809 CCDC96Q2M329 555 aa20.39■□□□□ 0.86
LTBP4-204ENST00000318809 TTBK2Q6IQ55 1244 aa20.39■□□□□ 0.86
LTBP4-204ENST00000318809 C19orf81C9J6K1 198 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 CXCL11O14625 94 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 KIF5BP33176 963 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 USP14P54578 494 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 FUT2Q10981 343 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 ASPRV1Q53RT3 343 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 SH3D19Q5HYK7 790 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 FAM83BQ5T0W9 1011 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 TMTC3Q6ZXV5 915 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 SRBD1Q8N5C6 995 aaKnown RBP20.39■□□□□ 0.85
LTBP4-204ENST00000318809 TNPO1Q92973 898 aaKnown RBP20.39■□□□□ 0.85
LTBP4-204ENST00000318809 C12orf42Q96LP6 360 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 RBM28Q9NW13 759 aaKnown RBP20.39■□□□□ 0.85
LTBP4-204ENST00000318809 PTPRFP10586 1907 aa20.39■□□□□ 0.85
LTBP4-204ENST00000318809 A0A0G2JLL6 359 aaPredicted RBP20.38■□□□□ 0.85
LTBP4-204ENST00000318809 KLRF2D3W0D1 207 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 JAK2O60674 1132 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 BMP3P12645 472 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 VCAM1P19320 739 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 MKRN3Q13064 507 aaKnown RBP20.38■□□□□ 0.85
LTBP4-204ENST00000318809 PPP2R5BQ15173 497 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 PRRT2Q7Z6L0 340 aaPredicted RBP20.38■□□□□ 0.85
LTBP4-204ENST00000318809 CCDC82Q8N4S0 544 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 NSUN7Q8NE18 718 aaKnown RBP20.38■□□□□ 0.85
LTBP4-204ENST00000318809 LPAR1Q92633 364 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
LTBP4-204ENST00000318809 ABT1Q9ULW3 272 aaKnown RBP20.38■□□□□ 0.85
LTBP4-204ENST00000318809 CCDC196A0A1B0GTZ2 297 aa20.37■□□□□ 0.85
LTBP4-204ENST00000318809 SPRYD7Q5W111 196 aa20.37■□□□□ 0.85
LTBP4-204ENST00000318809 CPLX1O14810 134 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 CYTH3O43739 400 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 SLC16A2P36021 539 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 ZNF157P51786 506 aaPredicted RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 MOGSQ13724 837 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 GPATCH4Q5T3I0 446 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 RGMBQ6NW40 437 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 PHKBQ93100 1093 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 TMEM232C9JQI7 657 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 WDR46O15213 610 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 IFNAR1P17181 557 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 LLPHQ9BRT6 129 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 WDR33Q9C0J8 1336 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 TMOD4Q9NZQ9 345 aa20.36■□□□□ 0.85
LTBP4-204ENST00000318809 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
LTBP4-204ENST00000318809 PTPDC1A2A3K4 754 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 PDCP20941 246 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 GNAQP50148 359 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 TREML2Q5T2D2 321 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 MS4A4AQ96JQ5 239 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 RPAP3Q9H6T3 665 aaPredicted RBP20.35■□□□□ 0.85
LTBP4-204ENST00000318809 FBXO28Q9NVF7 368 aa20.35■□□□□ 0.85
LTBP4-204ENST00000318809 CNTNAP5Q8WYK1 1306 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 DDX11L8A8MPP1 907 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 ZBTB48P10074 688 aaPredicted RBP20.34■□□□□ 0.85
LTBP4-204ENST00000318809 GJB2P29033 226 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 APLP1P51693 650 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 SNAPC2Q13487 334 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 CLEC17AQ6ZS10 378 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 DDX11Q96FC9 970 aa20.34■□□□□ 0.85
LTBP4-204ENST00000318809 hCG_1642624A0A1W2PR95 340 aa20.33■□□□□ 0.85
LTBP4-204ENST00000318809 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
LTBP4-204ENST00000318809 PTMSP20962 102 aa20.33■□□□□ 0.85
LTBP4-204ENST00000318809 MCM4P33991 863 aa20.33■□□□□ 0.85
LTBP4-204ENST00000318809 BTNL9Q6UXG8 535 aa20.33■□□□□ 0.85
LTBP4-204ENST00000318809 GADL1Q6ZQY3 521 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms