RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NAPBQ9H115 298 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 SMARCAL1Q9NZC9 954 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 TRIM75PA6NK02 468 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 KCNJ18B7U540 433 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 H0YHG0 523 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 TATP17735 454 aaPredicted RBP10.86□□□□□ -0.67
PTPRA-202ENST00000318266 TUBB4BP68371 445 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 KCNJ12Q14500 433 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 SMCR8Q8TEV9 937 aaPredicted RBP10.86□□□□□ -0.67
PTPRA-202ENST00000318266 CAPS2Q9BXY5 557 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 LACRTQ9GZZ8 138 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 GDAQ9Y2T3 454 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 TACC3Q9Y6A5 838 aa10.86□□□□□ -0.67
PTPRA-202ENST00000318266 MYH8P13535 1937 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 OVOS2A0A0G2JMS6 1433 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 ZEB2O60315 1214 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 TUBBP07437 444 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 HNRNPH1P31943 449 aaKnown RBP10.85□□□□□ -0.67
PTPRA-202ENST00000318266 ADD2P35612 726 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 CCDC51Q96ER9 411 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 VIPAS39Q9H9C1 493 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 NFAT5O94916 1531 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 SHTN1A0MZ66 631 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 PRKAB2O43741 272 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 IDEP14735 1019 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 IFNAR1P17181 557 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 INPP5BP32019 993 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 HERVK_113P62684 666 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 PDCLQ13371 301 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 TTF1Q15361 905 aaPredicted RBP10.85□□□□□ -0.67
PTPRA-202ENST00000318266 SH2D3CQ8N5H7 860 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 ANKRD20A12PQ8NF67 263 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 NELFBQ8WX92 580 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 WASF1Q92558 559 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 ARMT1Q9H993 441 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 CAPN7Q9Y6W3 813 aa10.85□□□□□ -0.67
PTPRA-202ENST00000318266 CXCR5P32302 372 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 TSR1Q2NL82 804 aaKnown RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 KCNV1Q6PIU1 500 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 ANKRD18AQ8IVF6 992 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 FOXP1Q9H334 677 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 MYO1AQ9UBC5 1043 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 LUC7L2Q9Y383 392 aaKnown RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 C5P01031 1676 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 NUP188Q5SRE5 1749 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 MYO1FO00160 1098 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 SNAP23O00161 211 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 CYP27B1O15528 508 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 WTAPQ15007 396 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 TCP11X2Q5H9J9 407 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 CCNI2Q6ZMN8 369 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 IFNL2Q8IZJ0 200 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 FAM107BQ9H098 131 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 EHD2Q9NZN4 543 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 MBD4O95243 580 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 ADAMTS2O95450 1211 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 PDE6AP16499 860 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 DNA2P51530 1060 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 PAK1Q13153 545 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 LDHAL6AQ6ZMR3 332 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 CCDC91Q7Z6B0 441 aa10.84□□□□□ -0.67
PTPRA-202ENST00000318266 EPB41L4AQ9HCS5 686 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 DMGDHQ9UI17 866 aaKnown RBP10.84□□□□□ -0.67
PTPRA-202ENST00000318266 AFDNP55196 1824 aaKnown RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 CPP00450 1065 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 KLK7P49862 253 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 IFIT5Q13325 482 aaKnown RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 EP400NLQ6ZTU2 488 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 SUGP1Q8IWZ8 645 aaKnown RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 ELOA2Q8IYF1 753 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 CRACR2BQ8N4Y2 399 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 ZNF579Q8NAF0 562 aaKnown RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 OR8K1Q8NGG5 319 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 ARL8AQ96BM9 186 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 GSDMAQ96QA5 445 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 PLIN2Q99541 437 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 JPH2Q9BR39 696 aaPredicted RBP10.83□□□□□ -0.68
PTPRA-202ENST00000318266 HAUS4Q9H6D7 363 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 XDHP47989 1333 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 SMIM22K7EJ46 135 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 PSMD14O00487 310 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 CIAO1O76071 339 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 DEXIO95424 95 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 MAP2K2P36507 400 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 PHKA1P46020 1223 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 TDO2P48775 406 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 TCIRG1Q13488 830 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 CHRNA2Q15822 529 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 MFSD6Q6ZSS7 791 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 RUFY1Q96T51 708 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 LRRC1Q9BTT6 524 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms