RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 NGLY1Q96IV0 654 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 ZNF646O15015 1829 aaPredicted RBP15.67■□□□□ 0.1
ATG4C-201ENST00000317868 VWA3AA6NCI4 1184 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 NLRP5P59047 1200 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 GSTO1P78417 241 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 BLIDQ8IZY5 108 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 STAG2Q8N3U4 1231 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 FEZ1Q99689 392 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 KAT14Q9H8E8 782 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 ADD3Q9UEY8 706 aaKnown RBP15.67■□□□□ 0.1
ATG4C-201ENST00000317868 CASP1P29466 404 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 NOVP48745 357 aa15.67■□□□□ 0.1
ATG4C-201ENST00000317868 PALM3A6NDB9 673 aaPredicted RBP15.66■□□□□ 0.1
ATG4C-201ENST00000317868 CYTH3O43739 400 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 FECHP22830 423 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 AFMP43652 599 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 PIP4K2BP78356 416 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 SMAP1Q8IYB5 467 aaPredicted RBP15.66■□□□□ 0.1
ATG4C-201ENST00000317868 DYNLL2Q96FJ2 89 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 JAG2Q9Y219 1238 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 PPP2R2CQ9Y2T4 447 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 IL1R1P14778 569 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 LONP1P36776 959 aaKnown RBP15.66■□□□□ 0.1
ATG4C-201ENST00000317868 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 IQUBQ8NA54 791 aa15.66■□□□□ 0.1
ATG4C-201ENST00000317868 BAG1Q99933 345 aaPredicted RBP15.66■□□□□ 0.1
ATG4C-201ENST00000317868 ITIH6Q6UXX5 1313 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
ATG4C-201ENST00000317868 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
ATG4C-201ENST00000317868 ADRA2BP18089 450 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 RASA1P20936 1047 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 HSP90AA4PQ58FG1 418 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 GALNT17Q6IS24 598 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 ZNF804AQ7Z570 1209 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 PANX2Q96RD6 677 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 C10orf71Q711Q0 1435 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 GNAQP50148 359 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 BRWD3Q6RI45 1802 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 ADAMTSL1Q8N6G6 1762 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 MYH4Q9Y623 1939 aa15.65■□□□□ 0.1
ATG4C-201ENST00000317868 LRRC10BA6NIK2 292 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 ZSCAN12O43309 604 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 USP5P45974 858 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 DIXDC1Q155Q3 683 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 TRAPPC3LQ5T215 181 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 FAM53CQ9NYF3 392 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 PCDHA6Q9UN73 950 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 PCDHA8Q9Y5H6 950 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 GPR75-ASB3A0A0A6YYF3 556 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 STXBP3O00186 592 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 BAG3O95817 575 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 CDK11BP21127 795 aaKnown RBP15.64■□□□□ 0.09
ATG4C-201ENST00000317868 RFC4P35249 363 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 WWC2Q6AWC2 1192 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 CNBD1Q8NA66 436 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 ZNF397Q8NF99 534 aaPredicted RBP15.64■□□□□ 0.09
ATG4C-201ENST00000317868 BARHL2Q9NY43 387 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 ANKIB1Q9P2G1 1089 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.64■□□□□ 0.095e-7■■■■□ 25.2
ATG4C-201ENST00000317868 USP17L3A6NCW0 530 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 USP17L4A6NCW7 530 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 GOLGA6L9A6NEM1 432 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 TEX33O43247 280 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 MCM7P33993 719 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 GPSM2P81274 684 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 KMT5BQ4FZB7 885 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 C16orf86Q6ZW13 317 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 USP17L1Q7RTZ2 530 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 GPKOWQ92917 476 aaPredicted RBP eCLIP15.64■□□□□ 0.09
ATG4C-201ENST00000317868 FAM163AQ96GL9 167 aaPredicted RBP15.64■□□□□ 0.09
ATG4C-201ENST00000317868 CTAGE1Q96RT6 745 aa15.64■□□□□ 0.09
ATG4C-201ENST00000317868 LIMA1Q9UHB6 759 aaKnown RBP15.64■□□□□ 0.09
ATG4C-201ENST00000317868 ARFGEF1Q9Y6D6 1849 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 PLIN4Q96Q06 1357 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 GAKO14976 1311 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 SPATA31A6Q5VVP1 1343 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 NAALADL2Q58DX5 795 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 LRRN4CLQ8ND94 238 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 SPZ1Q9BXG8 430 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 RWDD2AQ9UIY3 292 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 DDX41Q9UJV9 622 aaKnown RBP15.63■□□□□ 0.09
ATG4C-201ENST00000317868 USP21Q9UK80 565 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 PARP3Q9Y6F1 533 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
ATG4C-201ENST00000317868 ADKP55263 362 aaKnown RBP15.63■□□□□ 0.09
ATG4C-201ENST00000317868 SMYD4Q8IYR2 804 aaPredicted RBP15.63■□□□□ 0.09
ATG4C-201ENST00000317868 TMEM47Q9BQJ4 181 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 CD209Q9NNX6 404 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 PODXL2Q9NZ53 605 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 SIPA1L1O43166 1804 aa15.63■□□□□ 0.09
ATG4C-201ENST00000317868 LDHCP07864 332 aa15.62■□□□□ 0.09
ATG4C-201ENST00000317868 H2AFXP16104 143 aaPredicted RBP15.62■□□□□ 0.09
ATG4C-201ENST00000317868 ELF2Q15723 593 aa15.62■□□□□ 0.09
ATG4C-201ENST00000317868 ZNF658Q5TYW1 1059 aaPredicted RBP15.62■□□□□ 0.09
ATG4C-201ENST00000317868 TOGARAM2Q6ZUX3 1019 aa15.62■□□□□ 0.09
ATG4C-201ENST00000317868 CCDC148Q8NFR7 591 aa15.62■□□□□ 0.09
ATG4C-201ENST00000317868 TGFBRAP1Q8WUH2 860 aa15.62■□□□□ 0.09
ATG4C-201ENST00000317868 LZTS2Q9BRK4 669 aa15.62■□□□□ 0.09
ATG4C-201ENST00000317868 LRRC4BQ9NT99 713 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms