RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 ADRA2BP18089 450 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 TBX2Q13207 712 aaPredicted RBP23.47■■□□□ 1.35
TTC39C-202ENST00000317571 CUL4BQ13620 913 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 BLIDQ8IZY5 108 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 TMEM47Q9BQJ4 181 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 NOL10Q9BSC4 688 aaKnown RBP23.47■■□□□ 1.35
TTC39C-202ENST00000317571 CPVLQ9H3G5 476 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 POLLQ9UGP5 575 aa23.47■■□□□ 1.35
TTC39C-202ENST00000317571 TSPY3P0CV98 308 aa23.46■■□□□ 1.35
TTC39C-202ENST00000317571 TSPY8P0CW00 308 aa23.46■■□□□ 1.35
TTC39C-202ENST00000317571 WWC2Q6AWC2 1192 aa23.46■■□□□ 1.35
TTC39C-202ENST00000317571 APTXQ7Z2E3 356 aaKnown RBP23.46■■□□□ 1.35
TTC39C-202ENST00000317571 TCP11L1Q9NUJ3 509 aa23.46■■□□□ 1.35
TTC39C-202ENST00000317571 LTBP1Q14766 1721 aa23.46■■□□□ 1.35
TTC39C-202ENST00000317571 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.35
TTC39C-202ENST00000317571 TOP1P11387 765 aaKnown RBP23.45■■□□□ 1.35
TTC39C-202ENST00000317571 TRAPPC10P48553 1259 aa23.45■■□□□ 1.35
TTC39C-202ENST00000317571 PDXDC2PQ6P474 469 aa23.45■■□□□ 1.34
TTC39C-202ENST00000317571 DACH1Q9UI36 760 aa23.45■■□□□ 1.34
TTC39C-202ENST00000317571 GPR75-ASB3A0A0A6YYF3 556 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 GOLGA8HP0CJ92 632 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 CDC25AP30304 524 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 STX17P56962 302 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 RHBDL3P58872 404 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 GGA1Q9UJY5 639 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 PCDHA4Q9UN74 947 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 ERCC5P28715 1186 aaPredicted RBP23.44■■□□□ 1.34
TTC39C-202ENST00000317571 PPP4R3BQ5MIZ7 849 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 BLZF1Q9H2G9 400 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 STX8Q9UNK0 236 aa23.44■■□□□ 1.34
TTC39C-202ENST00000317571 FLT1P17948 1338 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 PALM3A6NDB9 673 aaPredicted RBP23.43■■□□□ 1.34
TTC39C-202ENST00000317571 PPP1R3GB7ZBB8 358 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 IGSF3O75054 1194 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 KLHL10Q6JEL2 608 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 LDHCP07864 332 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 ATP2B4P23634 1241 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 ZNF444Q8N0Y2 327 aaPredicted RBP23.43■■□□□ 1.34
TTC39C-202ENST00000317571 TBC1D16Q8TBP0 767 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 SH3GLB2Q9NR46 395 aa23.43■■□□□ 1.34
TTC39C-202ENST00000317571 CDK8P49336 464 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
TTC39C-202ENST00000317571 PCDHA6Q9UN73 950 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 PCDHA8Q9Y5H6 950 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 MYH1P12882 1939 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 STXBP3O00186 592 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 FANCGO15287 622 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 COBLO75128 1261 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 CDK11BP21127 795 aaKnown RBP23.42■■□□□ 1.34
TTC39C-202ENST00000317571 CALML3P27482 149 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 ST5P78524 1137 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 MFSD14BQ5SR56 506 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 C16orf86Q6ZW13 317 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 TEX11Q8IYF3 940 aa23.42■■□□□ 1.34
TTC39C-202ENST00000317571 NR1I3Q14994 352 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 PDCL2Q8N4E4 241 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 TC2NQ8N9U0 490 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 RBM17Q96I25 401 aaKnown RBP23.41■■□□□ 1.34
TTC39C-202ENST00000317571 GSDMAQ96QA5 445 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 TMEM60Q9H2L4 133 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 ZNF215Q9UL58 517 aaPredicted RBP23.41■■□□□ 1.34
TTC39C-202ENST00000317571 LRRC37AA6NMS7 1700 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 SYNRGQ9UMZ2 1314 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 TEX33O43247 280 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
TTC39C-202ENST00000317571 A0A1B0GTH6 734 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 POLRMTO00411 1230 aaKnown RBP23.4■■□□□ 1.34
TTC39C-202ENST00000317571 DHX8Q14562 1220 aaKnown RBP23.4■■□□□ 1.34
TTC39C-202ENST00000317571 HEATR3Q7Z4Q2 680 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 EYA3Q99504 573 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 HOXA10P31260 410 aaPredicted RBP23.4■■□□□ 1.34
TTC39C-202ENST00000317571 ADKP55263 362 aaKnown RBP23.4■■□□□ 1.34
TTC39C-202ENST00000317571 CDKAL1Q5VV42 579 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 SYT10Q6XYQ8 523 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 REXO1L1PQ8IX06 675 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 AMOTL1Q8IY63 956 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 BARHL2Q9NY43 387 aa23.4■■□□□ 1.34
TTC39C-202ENST00000317571 FOCADQ5VW36 1801 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 GAKO14976 1311 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 PP2D1A8MPX8 630 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 NT5C2P49902 561 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 SPATA1Q5VX52 437 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 SPECC1LQ69YQ0 1117 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 KIF18AQ8NI77 898 aa23.39■■□□□ 1.34
TTC39C-202ENST00000317571 INF2Q27J81 1249 aa23.39■■□□□ 1.33
TTC39C-202ENST00000317571 SMAP1Q8IYB5 467 aaPredicted RBP23.39■■□□□ 1.33
TTC39C-202ENST00000317571 IQUBQ8NA54 791 aa23.39■■□□□ 1.33
TTC39C-202ENST00000317571 DAGLBQ8NCG7 672 aa23.39■■□□□ 1.33
TTC39C-202ENST00000317571 ANKRD31Q8N7Z5 1873 aa23.38■■□□□ 1.33
TTC39C-202ENST00000317571 GNAQP50148 359 aa23.38■■□□□ 1.33
TTC39C-202ENST00000317571 KARSQ15046 597 aaKnown RBP23.38■■□□□ 1.33
TTC39C-202ENST00000317571 SYCP1Q15431 976 aa23.38■■□□□ 1.33
TTC39C-202ENST00000317571 ARL6IP4Q66PJ3 421 aaKnown RBP23.38■■□□□ 1.33
TTC39C-202ENST00000317571 NEDD1Q8NHV4 660 aa23.38■■□□□ 1.33
TTC39C-202ENST00000317571 LRRC15Q8TF66 581 aa23.38■■□□□ 1.33
TTC39C-202ENST00000317571 TRIM65Q6PJ69 517 aa23.38■■□□□ 1.33
TTC39C-202ENST00000317571 FAM163AQ96GL9 167 aaPredicted RBP23.38■■□□□ 1.33
TTC39C-202ENST00000317571 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.38■■□□□ 1.33
TTC39C-202ENST00000317571 V9GYY5 206 aaPredicted RBP23.38■■□□□ 1.33
TTC39C-202ENST00000317571 KLRF2D3W0D1 207 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms