RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 POTEEQ6S8J3 1075 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 CYB5R4Q7L1T6 521 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 FASTKD5Q7L8L6 764 aaKnown RBP9.28□□□□□ -0.92
CDC42-201ENST00000315554 RASGRP2Q7LDG7 609 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 CHST3Q7LGC8 479 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 ANKRD23Q86SG2 305 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 TBC1D2Q9BYX2 928 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 KIAA1683Q9H0B3 1180 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 IL17RBQ9NRM6 502 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 MTMR4Q9NYA4 1195 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 STX8Q9UNK0 236 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 LAMA4Q16363 1823 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 C19orf81C9J6K1 198 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 PEX10O60683 326 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 VCAM1P19320 739 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 LBX1P52954 281 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 NECTIN1Q15223 517 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
CDC42-201ENST00000315554 ESR2Q92731 530 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■□□□ 12.6
CDC42-201ENST00000315554 NUP88Q99567 741 aaPredicted RBP9.28□□□□□ -0.92
CDC42-201ENST00000315554 NYAP2Q9P242 653 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 ISY1Q9ULR0 285 aaKnown RBP9.28□□□□□ -0.92
CDC42-201ENST00000315554 AGTPBP1Q9UPW5 1226 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 TMX2Q9Y320 296 aa9.28□□□□□ -0.92
CDC42-201ENST00000315554 PLIN4Q96Q06 1357 aa9.27□□□□□ -0.92
CDC42-201ENST00000315554 PTPRFP10586 1907 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 GREB1LQ9C091 1923 aaPredicted RBP9.27□□□□□ -0.93
CDC42-201ENST00000315554 CA12O43570 354 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 TTLL1O95922 423 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 ALDH1A1P00352 501 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 USP14P54578 494 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 KRT23Q9C075 422 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 ASCC2Q9H1I8 757 aaPredicted RBP9.27□□□□□ -0.93
CDC42-201ENST00000315554 RPAP3Q9H6T3 665 aaPredicted RBP9.27□□□□□ -0.93
CDC42-201ENST00000315554 SH2D4AQ9H788 454 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 VCPKMTQ9H867 229 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 ZFYVE28Q9HCC9 887 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 ZSWIM5Q9P217 1185 aa9.27□□□□□ -0.93
CDC42-201ENST00000315554 LOC285556D6RIA3 1793 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 REC8O95072 547 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 NDUFB10O96000 172 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 CTCFP49711 727 aaPredicted RBP9.26□□□□□ -0.93
CDC42-201ENST00000315554 IRX3P78415 501 aaPredicted RBP9.26□□□□□ -0.93
CDC42-201ENST00000315554 TRDNQ13061 729 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 FAM83BQ5T0W9 1011 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 RALYLQ86SE5 291 aaKnown RBP9.26□□□□□ -0.93
CDC42-201ENST00000315554 C12orf42Q96LP6 360 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 P2RX7Q99572 595 aaKnown RBP9.26□□□□□ -0.93
CDC42-201ENST00000315554 TMEM47Q9BQJ4 181 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 CNNM2Q9H8M5 875 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 GPHNQ9NQX3 736 aaPredicted RBP9.26□□□□□ -0.93
CDC42-201ENST00000315554 SAGE1Q9NXZ1 904 aa9.26□□□□□ -0.93
CDC42-201ENST00000315554 TNKSO95271 1327 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 F5H6K3 240 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 GPR25O00155 361 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 PCP11498 1178 aaKnown RBP9.25□□□□□ -0.93
CDC42-201ENST00000315554 CPA1P15085 419 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 OSBPP22059 807 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 ANTXR2P58335 489 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 KLRC3Q07444 240 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 ADCK5Q3MIX3 580 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 C8orf34Q49A92 452 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 SLFN13Q68D06 897 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 RCSD1Q6JBY9 416 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 MB21D2Q8IYB1 491 aaPredicted RBP9.25□□□□□ -0.93
CDC42-201ENST00000315554 NCOA7Q8NI08 942 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 SMCR8Q8TEV9 937 aaPredicted RBP9.25□□□□□ -0.93
CDC42-201ENST00000315554 TCEANC2Q96MN5 208 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 ZSCAN10Q96SZ4 725 aaPredicted RBP9.25□□□□□ -0.93
CDC42-201ENST00000315554 PARK7Q99497 189 aaKnown RBP9.25□□□□□ -0.93
CDC42-201ENST00000315554 UBAC1Q9BSL1 405 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 USP26Q9BXU7 913 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 LRRC2Q9BYS8 371 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 SENP2Q9HC62 589 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 GOPCQ9HD26 462 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 FBXO28Q9NVF7 368 aa9.25□□□□□ -0.93
CDC42-201ENST00000315554 ADGRA2Q96PE1 1338 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 TLR2O60603 784 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 MCCP23508 829 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 BRD2P25440 801 aaKnown RBP9.24□□□□□ -0.93
CDC42-201ENST00000315554 HSPA4P34932 840 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDC42-201ENST00000315554 RNF20Q5VTR2 975 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 ADGRD1Q6QNK2 874 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 CATSPERGQ6ZRH7 1159 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 IQCA1Q86XH1 822 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 ANKRD13CQ8N6S4 541 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms