RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 HOXA13P31271 388 aaPredicted RBP15.91■□□□□ 0.14
EDC3-201ENST00000315127 ADKP55263 362 aaKnown RBP15.91■□□□□ 0.14
EDC3-201ENST00000315127 PCDHA1Q9Y5I3 950 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L15C9J2P7 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L13C9JLJ4 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L11C9JVI0 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L18D6R9N7 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L22D6RA61 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L17D6RBQ6 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L19D6RCP7 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L20D6RJB6 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L24Q0WX57 530 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 USP17L6PQ6QN14 398 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 ZNF512BQ96KM6 892 aaPredicted RBP15.91■□□□□ 0.14
EDC3-201ENST00000315127 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 RFX7Q2KHR2 1363 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 TBCKQ8TEA7 893 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 PPP1R9BQ96SB3 815 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 RAB34Q9BZG1 259 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
EDC3-201ENST00000315127 KRT79Q5XKE5 535 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 TMEM87AQ8NBN3 555 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 FLAD1Q8NFF5 587 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 SNX29Q8TEQ0 813 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 TAB2Q9NYJ8 693 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 FLT1P17948 1338 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 ADCY7P51828 1080 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 NLRP12P59046 1061 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 PDE4DQ08499 809 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 NELFCDQ8IXH7 590 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 LRWD1Q9UFC0 647 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 FAM208AQ9UK61 1670 aaKnown RBP15.9■□□□□ 0.14
EDC3-201ENST00000315127 NEMFO60524 1076 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 DDAH1O94760 285 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 TTLL6Q8N841 843 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 LZTFL1Q9NQ48 299 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.9■□□□□ 0.147e-8■■■■■ 96.9
EDC3-201ENST00000315127 TACC3Q9Y6A5 838 aa15.9■□□□□ 0.14
EDC3-201ENST00000315127 GRM1Q13255 1194 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 ABCB5Q2M3G0 1257 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 EARS2Q5JPH6 523 aaKnown RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 NSMFQ6X4W1 530 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 MRPL12P52815 198 aaKnown RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 PRR16Q569H4 304 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 KANK3Q6NY19 840 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 FMR1NBQ8N0W7 255 aaPredicted RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 TROAPQ12815 778 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 R3HDM1Q15032 1099 aaKnown RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 NCAPH2Q6IBW4 605 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
EDC3-201ENST00000315127 DNAI1Q9UI46 699 aa15.89■□□□□ 0.13
EDC3-201ENST00000315127 USP17L10C9JJH3 530 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 CALCRLQ16602 461 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 ARHGAP29Q52LW3 1261 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 FAM217BQ9NTX9 383 aaPredicted RBP15.88■□□□□ 0.13
EDC3-201ENST00000315127 PRPF3O43395 683 aaKnown RBP15.88■□□□□ 0.13
EDC3-201ENST00000315127 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
EDC3-201ENST00000315127 CACTINQ8WUQ7 758 aaKnown RBP15.88■□□□□ 0.13
EDC3-201ENST00000315127 SEPT11Q9NVA2 429 aaKnown RBP15.88■□□□□ 0.13
EDC3-201ENST00000315127 RASA1P20936 1047 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 ARHGAP27Q6ZUM4 889 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 CABP7Q86V35 215 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 SP8Q8IXZ3 490 aa15.88■□□□□ 0.13
EDC3-201ENST00000315127 BMP15O95972 392 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 SRGNP10124 158 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 TRIM21P19474 475 aaKnown RBP15.87■□□□□ 0.13
EDC3-201ENST00000315127 WWC2Q6AWC2 1192 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 DRC1Q96MC2 740 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 TTLL1O95922 423 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 CCDC40Q4G0X9 1142 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 CDC42EP5Q6NZY7 148 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 ZFPM1Q8IX07 1006 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 TCHHQ07283 1943 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 GNG11P61952 73 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 DESI2Q9BSY9 194 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 ALDH8A1Q9H2A2 487 aaPredicted RBP15.87■□□□□ 0.13
EDC3-201ENST00000315127 SLC39A2Q9NP94 309 aa15.87■□□□□ 0.13
EDC3-201ENST00000315127 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
EDC3-201ENST00000315127 MYCLP12524 364 aaPredicted RBP15.86■□□□□ 0.13
EDC3-201ENST00000315127 UBXN1Q04323 297 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 NTRK3Q16288 839 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 SHROOM1Q2M3G4 852 aaPredicted RBP15.86■□□□□ 0.13
EDC3-201ENST00000315127 ZNF384Q8TF68 577 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 A0A1W2PQ27 194 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 A0A1W2PQ64 194 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 A0A1W2PQD8 194 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 MEIS1O00470 390 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 LRRC41Q15345 812 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 GLIPR1L2Q4G1C9 344 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 TDRD12Q587J7 1177 aaKnown RBP15.86■□□□□ 0.13
EDC3-201ENST00000315127 KCPQ6ZWJ8 1503 aa15.86■□□□□ 0.13
EDC3-201ENST00000315127 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms