RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 STK3Q13188 491 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 NOGQ13253 232 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 BRI3BPQ8WY22 251 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 MS4A4AQ96JQ5 239 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 RPAP3Q9H6T3 665 aaPredicted RBP18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 GPCPD1Q9NPB8 672 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 AOC2O75106 756 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 METAP2P50579 478 aaKnown RBP eCLIP18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 SREBF2Q12772 1141 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 TROAPQ12815 778 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 TREML2Q5T2D2 321 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 KCTD1Q719H9 257 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 TPCN1Q9ULQ1 816 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 LIMCH1Q9UPQ0 1083 aa18.33■□□□□ 0.53
TUBA3E-201ENST00000312988 GOLGA8HP0CJ92 632 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 PDIA3P30101 505 aaKnown RBP18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 KIF5BP33176 963 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 MCM2P49736 904 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 VEGFBP49765 207 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 GRM4Q14833 912 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 RTN1Q16799 776 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 ASPRV1Q53RT3 343 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 SLKQ9H2G2 1235 aaPredicted RBP18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 AGTPBP1Q9UPW5 1226 aa18.33■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L15C9J2P7 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L13C9JLJ4 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L11C9JVI0 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L18D6R9N7 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L22D6RA61 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L17D6RBQ6 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L19D6RCP7 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L20D6RJB6 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 SNHG28P0DPA3 235 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 EVCP57679 992 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 ZNF543Q08ER8 600 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 USP17L24Q0WX57 530 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 MOGSQ13724 837 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 GPATCH4Q5T3I0 446 aaKnown RBP18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 FANCBQ8NB91 859 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 LOC285556D6RIA3 1793 aa18.32■□□□□ 0.52
TUBA3E-201ENST00000312988 TMEM232C9JQI7 657 aa18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 RCAN1P53805 252 aa18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 INHBEP58166 350 aa18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 IRX3P78415 501 aaPredicted RBP18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 GPAT2Q6NUI2 795 aa18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 ZIC5Q96T25 663 aa18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 MAP3K14Q99558 947 aa18.31■□□□□ 0.52
TUBA3E-201ENST00000312988 TESPA1A2RU30 521 aaPredicted RBP18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 BTBD19C9JJ37 291 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 DHX16O60231 1041 aaKnown RBP18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 FLOT1O75955 427 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 OSBPP22059 807 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 GNAQP50148 359 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 OTUD7BQ6GQQ9 843 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 TTBK2Q6IQ55 1244 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 ANKRD23Q86SG2 305 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 RBM28Q9NW13 759 aaKnown RBP18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 MAD2L2Q9UI95 211 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 HPS5Q9UPZ3 1129 aa18.3■□□□□ 0.52
TUBA3E-201ENST00000312988 CCDC196A0A1B0GTZ2 297 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 KLRF2D3W0D1 207 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 PDHXO00330 501 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 SLC16A2P36021 539 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 STAT2P52630 851 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 ME3Q16798 604 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 FAM160B2Q86V87 743 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 FAM43AQ8N2R8 423 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 CHURC1Q8WUH1 139 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 NCOA5Q9HCD5 579 aaKnown RBP18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 FBXO28Q9NVF7 368 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 PNMA3Q9UL41 463 aa18.29■□□□□ 0.52
TUBA3E-201ENST00000312988 PALM3A6NDB9 673 aaPredicted RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 CPLX1O14810 134 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 PFKFB2O60825 505 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 LARGE1O95461 756 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 PTPN18Q99952 460 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 SLF1Q9BQI6 1058 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 SH2B1Q9NRF2 756 aaPredicted RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 CDC27P30260 824 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 MAP2K2P36507 400 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 PPP2R5BQ15173 497 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 SYDE2Q5VT97 1194 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms