RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 BMP3P12645 472 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 GCLCP48506 637 aaPredicted RBP20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 COG2Q14746 738 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 RASGRP2Q7LDG7 609 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 ANKRD13CQ8N6S4 541 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 GMCL1Q96IK5 515 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 FKTNO75072 461 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 COL9A3Q14050 684 aaPredicted RBP20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 SEC23AQ15436 765 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 ZNF296Q8WUU4 475 aaPredicted RBP20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 PAGR1Q9BTK6 254 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
SWSAP1-201ENST00000312423 ECM2O94769 699 aaPredicted RBP20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 HMGB1P09429 215 aaKnown RBP20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 SP3Q02447 781 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 C17orf99Q6UX52 265 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 KCTD1Q719H9 257 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 DCAF4Q8WV16 495 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
SWSAP1-201ENST00000312423 CASP8AP2Q9UKL3 1982 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 SPDYE16A6NNV3 312 aaPredicted RBP20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 PSMA5P28066 241 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 NOM1Q5C9Z4 860 aaKnown RBP20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 BLOC1S2Q6QNY1 142 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 NFXL1Q6ZNB6 911 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 GTF3C2Q8WUA4 911 aaPredicted RBP20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 TMEM87BQ96K49 555 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 TCEANC2Q96MN5 208 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 PARP14Q460N5 1801 aa20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 FRMPD2Q68DX3 1309 aaPredicted RBP20.49■□□□□ 0.87
SWSAP1-201ENST00000312423 TMEM232C9JQI7 657 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 BCRP11274 1271 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 CASTP20810 708 aaKnown RBP20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 FGD1P98174 961 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 IGDCC4Q8TDY8 1250 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 SLF1Q9BQI6 1058 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 FEM1BQ9UK73 627 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 PDHBP11177 359 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 CPA1P15085 419 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 DSG3P32926 999 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 STAT2P52630 851 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 KIFC2Q96AC6 838 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 ATG4CQ96DT6 458 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 MTA3Q9BTC8 594 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 SENP2Q9HC62 589 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 GPCPD1Q9NPB8 672 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 GPHNQ9NQX3 736 aaPredicted RBP20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 PPP1R9AQ9ULJ8 1098 aa20.48■□□□□ 0.87
SWSAP1-201ENST00000312423 RLFQ13129 1914 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 MYPNQ86TC9 1320 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 SH2B2O14492 632 aaPredicted RBP20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 PEX10O60683 326 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 KIF22Q14807 665 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 FAM110CQ1W6H9 321 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 CD99L2Q8TCZ2 262 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 LY9Q9HBG7 655 aa20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 CTDP1Q9Y5B0 961 aaPredicted RBP20.47■□□□□ 0.87
SWSAP1-201ENST00000312423 CCDC69A6NI79 296 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 CATIPQ7Z7H3 387 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 PRPF38AQ8NAV1 312 aaKnown RBP20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 GPRC5AQ8NFJ5 357 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 CHURC1Q8WUH1 139 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 ERO1AQ96HE7 468 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 TXNRD2Q9NNW7 524 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 RABGAP1Q9Y3P9 1069 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 WDR19Q8NEZ3 1342 aa20.46■□□□□ 0.87
SWSAP1-201ENST00000312423 LBX2Q6XYB7 198 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 FAM160B2Q86V87 743 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 TMTC2Q8N394 836 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 PRDM10Q9NQV6 1147 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 RBPJLQ9UBG7 517 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 COL11A1P12107 1806 aaPredicted RBP20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 A0A0G2JMZ2 1700 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 ERVK-9P63128 1117 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 ERVK-24P63145 666 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 LACTBP83111 547 aaPredicted RBP20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 EXOSC10Q01780 885 aaKnown RBP20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 ZNF543Q08ER8 600 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 PLS1Q14651 629 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 MB21D1Q8N884 522 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 MORF4L1Q9UBU8 362 aa20.45■□□□□ 0.86
SWSAP1-201ENST00000312423 PARP1P09874 1014 aaKnown RBP20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 SLC16A2P36021 539 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 GPATCH4Q5T3I0 446 aaKnown RBP20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 TTBK2Q6IQ55 1244 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 NUP133Q8WUM0 1156 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 BTBD7Q9P203 1132 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 CYP46A1Q9Y6A2 500 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 ZSWIM8A7E2V4 1837 aa20.44■□□□□ 0.86
SWSAP1-201ENST00000312423 VWA5AO00534 786 aa20.43■□□□□ 0.86
SWSAP1-201ENST00000312423 LIFRP42702 1097 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms