RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 CALML3P27482 149 aa12.77□□□□□ -0.36
TRIM59-201ENST00000309784 ASPRV1Q53RT3 343 aa12.77□□□□□ -0.36
TRIM59-201ENST00000309784 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.36
TRIM59-201ENST00000309784 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.36
TRIM59-201ENST00000309784 EPS15P42566 896 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 PFKFB3Q16875 520 aaPredicted RBP12.77□□□□□ -0.37
TRIM59-201ENST00000309784 KCNG4Q8TDN1 519 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 SDF4Q9BRK5 362 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 NUP62CLQ9H1M0 184 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 GGA3Q9NZ52 723 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.77□□□□□ -0.37
TRIM59-201ENST00000309784 RASSF8Q8NHQ8 419 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 DPF2Q92785 391 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 TNMDQ9H2S6 317 aa12.77□□□□□ -0.37
TRIM59-201ENST00000309784 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
TRIM59-201ENST00000309784 COL4A5P29400 1685 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 FZD9O00144 591 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 VEGFAP15692 232 aaPredicted RBP12.76□□□□□ -0.37
TRIM59-201ENST00000309784 PKN1Q16512 942 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 CKAP2LQ8IYA6 745 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 F5H6K3 240 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 LIG1P18858 919 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 PRELPP51888 382 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 KLRC3Q07444 240 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
TRIM59-201ENST00000309784 EAPPQ56P03 285 aaPredicted RBP12.76□□□□□ -0.37
TRIM59-201ENST00000309784 RILPL1Q5EBL4 403 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 ATL3Q6DD88 541 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 ANKS1AQ92625 1134 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 COA7Q96BR5 231 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 MARCH6O60337 910 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 SNAP25P60880 206 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 ZNF174Q15697 407 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
TRIM59-201ENST00000309784 L1TD1Q5T7N2 865 aaKnown RBP12.76□□□□□ -0.37
TRIM59-201ENST00000309784 C6orf50Q9HD87 102 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 LTBP3Q9NS15 1303 aa12.76□□□□□ -0.37
TRIM59-201ENST00000309784 A0A1B0GVL5 298 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
TRIM59-201ENST00000309784 SMCO2A6NFE2 343 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
TRIM59-201ENST00000309784 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 ECE1P42892 770 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 USH1GQ495M9 461 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 WWC2Q6AWC2 1192 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 FAM83AQ86UY5 434 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 BLIDQ8IZY5 108 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 PANK2Q9BZ23 570 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 CYTH3O43739 400 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
TRIM59-201ENST00000309784 MCM7P33993 719 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 JAKMIP3Q5VZ66 844 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 GPC2Q8N158 579 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 TMEM87AQ8NBN3 555 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 ZBTB21Q9ULJ3 1066 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 FZD1Q9UP38 647 aa12.75□□□□□ -0.37
TRIM59-201ENST00000309784 GNA11P29992 359 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 FUT2Q10981 343 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 LINC00301Q8NCQ3 95 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 RTEL1Q9NZ71 1219 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 PCDHA7Q9UN72 937 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 USP17L10C9JJH3 530 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
TRIM59-201ENST00000309784 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 PGBD1Q96JS3 809 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 ELP1O95163 1332 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 YEATS4O95619 227 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 ASNSP08243 561 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 YBX3P16989 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRIM59-201ENST00000309784 DCAF15Q66K64 600 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 ADGRF4Q8IZF3 695 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 MRPS27Q92552 414 aaKnown RBP12.74□□□□□ -0.37
TRIM59-201ENST00000309784 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
TRIM59-201ENST00000309784 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 BIN2Q9UBW5 565 aaPredicted RBP12.74□□□□□ -0.37
TRIM59-201ENST00000309784 RCOR1Q9UKL0 485 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 LAMB1P07942 1786 aa12.74□□□□□ -0.37
TRIM59-201ENST00000309784 NDUFB10O96000 172 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 BMP3P12645 472 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 PDILTQ8N807 584 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 PHF20Q9BVI0 1012 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 SPZ1Q9BXG8 430 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 ZNF341Q9BYN7 854 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms