RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MOGSQ13724 837 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 CCDC96Q2M329 555 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 FAM83BQ5T0W9 1011 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 KCTD1Q719H9 257 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 NCOA5Q9HCD5 579 aaKnown RBP31.67■■■□□ 2.66
HDAC3-201ENST00000305264 MAD2L2Q9UI95 211 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 GADL1Q6ZQY3 521 aa31.66■■■□□ 2.66
HDAC3-201ENST00000305264 STAG2Q8N3U4 1231 aa31.66■■■□□ 2.66
HDAC3-201ENST00000305264 FANCBQ8NB91 859 aa31.66■■■□□ 2.66
HDAC3-201ENST00000305264 GTF2A2P52657 109 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 ZNF543Q08ER8 600 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 GRM1Q13255 1194 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 NECAB1Q8N987 351 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 CTCFLQ8NI51 663 aaPredicted RBP31.65■■■□□ 2.66
HDAC3-201ENST00000305264 CCDC102AQ96A19 550 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 MAP3K14Q99558 947 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 ISY1Q9ULR0 285 aaKnown RBP31.65■■■□□ 2.66
HDAC3-201ENST00000305264 PFKFB2O60825 505 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 PARP1P09874 1014 aaKnown RBP31.65■■■□□ 2.66
HDAC3-201ENST00000305264 BMP3P12645 472 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 CDC27P30260 824 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 RTN1Q16799 776 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 DEFB115Q30KQ5 88 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 TREML2Q5T2D2 321 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 TMX3Q96JJ7 454 aa31.65■■■□□ 2.66
HDAC3-201ENST00000305264 SLKQ9H2G2 1235 aaPredicted RBP31.65■■■□□ 2.66
HDAC3-201ENST00000305264 FAM217BQ9NTX9 383 aaPredicted RBP31.65■■■□□ 2.66
HDAC3-201ENST00000305264 RBM19Q9Y4C8 960 aaKnown RBP31.65■■■□□ 2.66
HDAC3-201ENST00000305264 WDR46O15213 610 aaKnown RBP31.64■■■□□ 2.66
HDAC3-201ENST00000305264 ST3GAL1Q11201 340 aa31.64■■■□□ 2.66
HDAC3-201ENST00000305264 SCRN1Q12765 414 aa31.64■■■□□ 2.66
HDAC3-201ENST00000305264 PROCA1Q8NCQ7 364 aaPredicted RBP31.64■■■□□ 2.66
HDAC3-201ENST00000305264 GPCPD1Q9NPB8 672 aa31.64■■■□□ 2.66
HDAC3-201ENST00000305264 C1QTNF8P60827 252 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 ASPRV1Q53RT3 343 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 ZSCAN31Q96LW9 406 aaPredicted RBP31.63■■■□□ 2.65
HDAC3-201ENST00000305264 RPAP3Q9H6T3 665 aaPredicted RBP31.63■■■□□ 2.65
HDAC3-201ENST00000305264 PARP14Q460N5 1801 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 CCL15-CCL14A0A0B4J2E2 113 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 PALM3A6NDB9 673 aaPredicted RBP31.63■■■□□ 2.65
HDAC3-201ENST00000305264 CCL15Q16663 113 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 BRI3BPQ8WY22 251 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 GTF3C6Q969F1 213 aa31.63■■■□□ 2.65
HDAC3-201ENST00000305264 CETPP11597 493 aa31.62■■■□□ 2.65
HDAC3-201ENST00000305264 TTBK2Q6IQ55 1244 aa31.62■■■□□ 2.65
HDAC3-201ENST00000305264 HSCBQ8IWL3 235 aa31.62■■■□□ 2.65
HDAC3-201ENST00000305264 CPVLQ9H3G5 476 aa31.62■■■□□ 2.65
HDAC3-201ENST00000305264 SH2B1Q9NRF2 756 aaPredicted RBP31.62■■■□□ 2.65
HDAC3-201ENST00000305264 PLEKHA8P1O95397 391 aa31.61■■■□□ 2.65
HDAC3-201ENST00000305264 KIF5BP33176 963 aa31.61■■■□□ 2.65
HDAC3-201ENST00000305264 ADD1P35611 737 aaKnown RBP31.61■■■□□ 2.65
HDAC3-201ENST00000305264 K7ELQ4 463 aaPredicted RBP31.61■■■□□ 2.65
HDAC3-201ENST00000305264 GPATCH4Q5T3I0 446 aaKnown RBP31.61■■■□□ 2.65
HDAC3-201ENST00000305264 CMTR1Q8N1G2 835 aaKnown RBP31.61■■■□□ 2.65
HDAC3-201ENST00000305264 CAPNS2Q96L46 248 aa31.61■■■□□ 2.65
HDAC3-201ENST00000305264 TANGO6Q9C0B7 1094 aa31.61■■■□□ 2.65
HDAC3-201ENST00000305264 TMEM232C9JQI7 657 aa31.6■■■□□ 2.65
HDAC3-201ENST00000305264 FASTKD5Q7L8L6 764 aaKnown RBP31.6■■■□□ 2.65
HDAC3-201ENST00000305264 ZIC5Q96T25 663 aa31.6■■■□□ 2.65
HDAC3-201ENST00000305264 BAZ2BQ9UIF8 2168 aaKnown RBP31.6■■■□□ 2.65
HDAC3-201ENST00000305264 RLFQ13129 1914 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 GPAT2Q6NUI2 795 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 CCDC83Q8IWF9 413 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 FBXO28Q9NVF7 368 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 RBM28Q9NW13 759 aaKnown RBP31.59■■■□□ 2.65
HDAC3-201ENST00000305264 AGTPBP1Q9UPW5 1226 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 KLRF2D3W0D1 207 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 TMTC3Q6ZXV5 915 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 NBPF11Q86T75 865 aa31.59■■■□□ 2.65
HDAC3-201ENST00000305264 SLC16A2P36021 539 aa31.58■■■□□ 2.65
HDAC3-201ENST00000305264 SLC35G1Q2M3R5 365 aa31.58■■■□□ 2.65
HDAC3-201ENST00000305264 UBA5Q9GZZ9 404 aa31.58■■■□□ 2.65
HDAC3-201ENST00000305264 MANSC4A6NHS7 340 aaPredicted RBP31.57■■■□□ 2.65
HDAC3-201ENST00000305264 DTNBO60941 627 aa31.57■■■□□ 2.65
HDAC3-201ENST00000305264 HSPA6P17066 643 aa31.57■■■□□ 2.64
HDAC3-201ENST00000305264 PPP2R5BQ15173 497 aa31.57■■■□□ 2.64
HDAC3-201ENST00000305264 SRBD1Q8N5C6 995 aaKnown RBP31.57■■■□□ 2.64
HDAC3-201ENST00000305264 PTPN18Q99952 460 aa31.57■■■□□ 2.64
HDAC3-201ENST00000305264 CCDC196A0A1B0GTZ2 297 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 BTBD19C9JJ37 291 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 STAT2P52630 851 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 IKQ13123 557 aaPredicted RBP31.56■■■□□ 2.64
HDAC3-201ENST00000305264 CCDC82Q8N4S0 544 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 TESPA1A2RU30 521 aaPredicted RBP31.56■■■□□ 2.64
HDAC3-201ENST00000305264 AOC2O75106 756 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 PPFIA3O75145 1194 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 ANP32AP39687 249 aaKnown RBP31.56■■■□□ 2.64
HDAC3-201ENST00000305264 NTRK3Q16288 839 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 CATSPERGQ6ZRH7 1159 aa31.56■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L15C9J2P7 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L13C9JLJ4 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L11C9JVI0 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L18D6R9N7 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L22D6RA61 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L17D6RBQ6 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L19D6RCP7 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L20D6RJB6 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 FLOT1O75955 427 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 USP17L24Q0WX57 530 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 SAMD1Q6SPF0 538 aaPredicted RBP31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms