RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 A0A0G2JS52 829 aa16.44■□□□□ 0.22
CCNDBP1-201ENST00000300213 SARNPP82979 210 aaKnown RBP16.44■□□□□ 0.22
CCNDBP1-201ENST00000300213 WASF1Q92558 559 aa16.44■□□□□ 0.22
CCNDBP1-201ENST00000300213 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■□□ 18.5
CCNDBP1-201ENST00000300213 MMRN2Q9H8L6 949 aa16.44■□□□□ 0.22
CCNDBP1-201ENST00000300213 AGPAT5Q9NUQ2 364 aa16.44■□□□□ 0.22
CCNDBP1-201ENST00000300213 KIDINS220Q9ULH0 1771 aa16.44■□□□□ 0.22
CCNDBP1-201ENST00000300213 A0A1B0GUA9 196 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 KLK7P49862 253 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 EHBP1Q8NDI1 1231 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 SLC4A4Q9Y6R1 1079 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 CLTAP09496 248 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 LSP1P33241 339 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 IL15P40933 162 aaPredicted RBP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 AARSP49588 968 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 MSL1Q68DK7 614 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 ZIM3Q96PE6 472 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 ABCA9Q8IUA7 1624 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 NR1D1P20393 614 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 GPTP24298 496 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 GSCP56915 257 aaPredicted RBP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 MDM2Q00987 491 aaPredicted RBP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 METTL24Q5JXM2 366 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 NAA35Q5VZE5 725 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 TCP11Q8WWU5 503 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 THOC1Q96FV9 657 aaKnown RBP16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 CCT8L2Q96SF2 557 aa16.43■□□□□ 0.22
CCNDBP1-201ENST00000300213 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 KIF1CO43896 1103 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 XBP1P17861 261 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 DPYDQ12882 1025 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 PPP1R7Q15435 360 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 CCDC13Q8IYE1 715 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 ZNF473Q8WTR7 871 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 APPBP2Q92624 585 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 BRD2P25440 801 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 CUL4BQ13620 913 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 TAX1BP1Q86VP1 789 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 MICAL1Q8TDZ2 1067 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 CCDC113Q9H0I3 377 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 SLC40A1Q9NP59 571 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 A0A087X0B3 334 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 AMPD2Q01433 879 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 SPAG1Q07617 926 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 WTAPQ15007 396 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 TTMPQ5BVD1 217 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 OR2W6PQ8NHA6 318 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
CCNDBP1-201ENST00000300213 EYA2O00167 538 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 ACTN4O43707 911 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 PARP1P09874 1014 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 TCP11X2Q5H9J9 407 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 TBC1D2BQ9UPU7 963 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 REXO2Q9Y3B8 237 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 NLRP14Q86W24 1093 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 SPATA4Q8NEY3 305 aa16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-201ENST00000300213 PXDNLA1KZ92 1463 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 KIF4AO95239 1232 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 MMP1P03956 469 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 TMOD1P28289 359 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 CARSP49589 748 aaKnown RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 HIBCHQ6NVY1 386 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 AGLP35573 1532 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 TLDC2A0PJX2 215 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 SH2B2O14492 632 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 PLEKP08567 350 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 CALRP27797 417 aaKnown RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 HERVK_113P62684 666 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 UBLCP1Q8WVY7 318 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 ALS2CR12Q96Q35 445 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 HEXIM1O94992 359 aaKnown RBP16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 SATB1Q01826 763 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
CCNDBP1-201ENST00000300213 KRT12Q99456 494 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms