RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDH8-201ENST00000299345 GTPBP6O43824 516 aaPredicted RBP15.4■□□□□ 0.06
CDH8-201ENST00000299345 CCDC12Q8WUD4 166 aaPredicted RBP15.4■□□□□ 0.06
CDH8-201ENST00000299345 COBLO75128 1261 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 VEGFAP15692 232 aaPredicted RBP15.39■□□□□ 0.05
CDH8-201ENST00000299345 PLCG2P16885 1265 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 LONP1P36776 959 aaKnown RBP15.39■□□□□ 0.05
CDH8-201ENST00000299345 BTDP43251 543 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 DPYDQ12882 1025 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 PLIN2Q99541 437 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 TCP11L1Q9NUJ3 509 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 INTS13Q9NVM9 706 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 ARGLU1Q9NWB6 273 aaPredicted RBP15.39■□□□□ 0.05
CDH8-201ENST00000299345 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 INF2Q27J81 1249 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 EYA3Q99504 573 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 CCDC175P0C221 793 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 NT5C2P49902 561 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 PAK1Q13153 545 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 KARSQ15046 597 aaKnown RBP15.39■□□□□ 0.05
CDH8-201ENST00000299345 ERCC6LQ2NKX8 1250 aa15.39■□□□□ 0.05
CDH8-201ENST00000299345 TSR1Q2NL82 804 aaKnown RBP15.39■□□□□ 0.05
CDH8-201ENST00000299345 ARL6IP4Q66PJ3 421 aaKnown RBP15.39■□□□□ 0.05
CDH8-201ENST00000299345 G3V3G9 751 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
CDH8-201ENST00000299345 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 DESI2Q9BSY9 194 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 SRRTQ9BXP5 876 aaKnown RBP15.38■□□□□ 0.05
CDH8-201ENST00000299345 VPS16Q9H269 839 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 SH3GLB2Q9NR46 395 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
CDH8-201ENST00000299345 TEX33O43247 280 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 TM4SF1P30408 202 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 GRM4Q14833 912 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 SPATA20Q8TB22 786 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 TNFRSF25Q93038 417 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 PHLPP2Q6ZVD8 1323 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 CUL4BQ13620 913 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 NR1I3Q14994 352 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 MFSD14BQ5SR56 506 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 TC2NQ8N9U0 490 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
CDH8-201ENST00000299345 TMEM47Q9BQJ4 181 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 ZMYND15Q9H091 742 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
CDH8-201ENST00000299345 MAGEC2Q9UBF1 373 aaPredicted RBP15.38■□□□□ 0.05
CDH8-201ENST00000299345 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
CDH8-201ENST00000299345 ATP2B4P23634 1241 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 NPY5RQ15761 445 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 NELFBQ8WX92 580 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
CDH8-201ENST00000299345 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 IL17RBQ9NRM6 502 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 A0A1B0GTH6 734 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 RPN1P04843 607 aaKnown RBP15.37■□□□□ 0.05
CDH8-201ENST00000299345 LETM2Q2VYF4 491 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 ARHGAP29Q52LW3 1261 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 RRP36Q96EU6 259 aaKnown RBP15.37■□□□□ 0.05
CDH8-201ENST00000299345 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 MORC2Q9Y6X9 1032 aaPredicted RBP15.37■□□□□ 0.05
CDH8-201ENST00000299345 COL22A1Q8NFW1 1626 aaPredicted RBP15.37■□□□□ 0.05
CDH8-201ENST00000299345 GALNT17Q6IS24 598 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 CNGA4Q8IV77 575 aa15.37■□□□□ 0.05
CDH8-201ENST00000299345 DDX60Q8IY21 1712 aaKnown RBP15.36■□□□□ 0.05
CDH8-201ENST00000299345 MYH2Q9UKX2 1941 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 GNA11P29992 359 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 SMAP1Q8IYB5 467 aaPredicted RBP15.36■□□□□ 0.05
CDH8-201ENST00000299345 DOCK2Q92608 1830 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 CARD6Q9BX69 1037 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 LZTFL1Q9NQ48 299 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 KIF5CO60282 957 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 GPSM2P81274 684 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 RBL2Q08999 1139 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
CDH8-201ENST00000299345 CPVLQ9H3G5 476 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 TAB2Q9NYJ8 693 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
CDH8-201ENST00000299345 CHD4Q14839 1912 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 PPP4CP60510 307 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 TBX2Q13207 712 aaPredicted RBP15.35■□□□□ 0.05
CDH8-201ENST00000299345 PICALMQ13492 652 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 TOGARAM2Q6ZUX3 1019 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 L2HGDHQ9H9P8 463 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 CICQ96RK0 1608 aaPredicted RBP15.35■□□□□ 0.05
CDH8-201ENST00000299345 PHLPP1O60346 1717 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 PPP1R3GB7ZBB8 358 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 MARCH6O60337 910 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 IGSF3O75054 1194 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 CDK8P49336 464 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 REXO1L1PQ8IX06 675 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms