RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CUL4BQ13620 913 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 CT47A1Q5JQC4 288 aaPredicted RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 MAATS1Q7Z4T9 603 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 SECISBP2LQ93073 1101 aaKnown RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 ANKRD18BA2A2Z9 1011 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 CIAO1O76071 339 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 NBPF10Q6P3W6 841 aaKnown RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 VIPAS39Q9H9C1 493 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 FAM217BQ9NTX9 383 aaPredicted RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 BCCIPQ9P287 314 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 MYBL2P10244 700 aa12.77□□□□□ -0.36
TRUB1-201ENST00000298746 ITGA6P23229 1130 aa12.77□□□□□ -0.36
TRUB1-201ENST00000298746 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.36
TRUB1-201ENST00000298746 CASP7P55210 303 aa12.77□□□□□ -0.36
TRUB1-201ENST00000298746 ODF2Q5BJF6 829 aa12.77□□□□□ -0.36
TRUB1-201ENST00000298746 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.36
TRUB1-201ENST00000298746 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.36
TRUB1-201ENST00000298746 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.36
TRUB1-201ENST00000298746 NWD1Q149M9 1564 aa12.77□□□□□ -0.36
TRUB1-201ENST00000298746 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 PSMA7O14818 248 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
TRUB1-201ENST00000298746 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 NBPF3Q9H094 633 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 YY1AP1Q9H869 796 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 RMND1Q9NWS8 449 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 LRRC37A3O60309 1634 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 ABCC6O95255 1503 aa12.77□□□□□ -0.37
TRUB1-201ENST00000298746 B4DLN1 442 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 LIFRP42702 1097 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 CFAP58Q5T655 872 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 CCNI2Q6ZMN8 369 aaPredicted RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 TRAPPC11Q7Z392 1133 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 SH2D3CQ8N5H7 860 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 AATFQ9NY61 560 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 DIP2AQ14689 1571 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 PATL2C9JE40 543 aaKnown RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 SNAP23O00161 211 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 HNRNPH1P31943 449 aaKnown RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 ATP6V1AP38606 617 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 VAV2P52735 878 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 HLTFQ14527 1009 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 CDKAL1Q5VV42 579 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 C8orf74Q6P047 294 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 TANGO6Q9C0B7 1094 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 UBA7P41226 1012 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 DPYDQ12882 1025 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC178Q5BJE1 867 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 B4GALNT4Q76KP1 1039 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 SGMS1Q86VZ5 419 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 CSGALNACT2Q8N6G5 542 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 ALS2CR12Q96Q35 445 aa12.76□□□□□ -0.37
TRUB1-201ENST00000298746 RNF41Q9H4P4 317 aaPredicted RBP12.76□□□□□ -0.37
TRUB1-201ENST00000298746 PIK3C2AO00443 1686 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 BMP15O95972 392 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 MICALCLQ6ZW33 695 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 STRBPQ96SI9 672 aaKnown RBP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 LRRC1Q9BTT6 524 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 PRCPP42785 496 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 TOM1L2Q6ZVM7 507 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 KRT26Q7Z3Y9 468 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 LACRTQ9GZZ8 138 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 RWDD2AQ9UIY3 292 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 RGPD8O14715 1765 aaPredicted RBP12.75□□□□□ -0.37
TRUB1-201ENST00000298746 SEMA3EO15041 775 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 CYP27B1O15528 508 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 IFIH1Q9BYX4 1025 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms