RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 BRIP1Q9BX63 1249 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 SUGCTQ9HAC7 445 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 TRIM10Q9UDY6 481 aa27.6■■■□□ 2.01
SPTSSA-201ENST00000298130 CHMP4BP1P59074 171 aa27.59■■■□□ 2.01
SPTSSA-201ENST00000298130 TXNRD3Q86VQ6 643 aa27.59■■■□□ 2.01
SPTSSA-201ENST00000298130 DYNLL2Q96FJ2 89 aa27.59■■■□□ 2.01
SPTSSA-201ENST00000298130 RASGRP2Q7LDG7 609 aa27.59■■■□□ 2.01
SPTSSA-201ENST00000298130 RASSF8Q8NHQ8 419 aa27.59■■■□□ 2.01
SPTSSA-201ENST00000298130 TRERF1Q96PN7 1200 aa27.59■■■□□ 2.01
SPTSSA-201ENST00000298130 RHOXF2BP0C7M4 288 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 WWC2Q6AWC2 1192 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 CHP1Q99653 195 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 RHOXF2Q9BQY4 288 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 CPVLQ9H3G5 476 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 ARFGAP3Q9NP61 516 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 TYW1BQ6NUM6 668 aa27.58■■■□□ 2.01
SPTSSA-201ENST00000298130 NHSL1Q5SYE7 1610 aa27.57■■■□□ 2
SPTSSA-201ENST00000298130 PRCPP42785 496 aa27.57■■■□□ 2
SPTSSA-201ENST00000298130 UBE4AQ14139 1066 aa27.57■■■□□ 2
SPTSSA-201ENST00000298130 PPP2R5BQ15173 497 aa27.57■■■□□ 2
SPTSSA-201ENST00000298130 MCM9Q9NXL9 1143 aa27.57■■■□□ 2
SPTSSA-201ENST00000298130 MYH14Q7Z406 1995 aaKnown RBP27.57■■■□□ 2
SPTSSA-201ENST00000298130 ZBTB22O15209 634 aa27.57■■■□□ 2
SPTSSA-201ENST00000298130 COPB1P53618 953 aaKnown RBP27.57■■■□□ 2
SPTSSA-201ENST00000298130 SMC1AQ14683 1233 aaKnown RBP27.57■■■□□ 2
SPTSSA-201ENST00000298130 PMS1P54277 932 aaKnown RBP27.56■■■□□ 2
SPTSSA-201ENST00000298130 PAK1Q13153 545 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 CTAGE1Q96RT6 745 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 BSDC1Q9NW68 430 aaPredicted RBP27.56■■■□□ 2
SPTSSA-201ENST00000298130 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.56■■■□□ 2
SPTSSA-201ENST00000298130 DUOX1Q9NRD9 1551 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 KCNJ18B7U540 433 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 KCNJ12Q14500 433 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 RABGGTAQ92696 567 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 PNKPQ96T60 521 aa27.56■■■□□ 2
SPTSSA-201ENST00000298130 DDAH1O94760 285 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 TPM1P09493 284 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 UBXN1Q04323 297 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 ABHD10Q9NUJ1 306 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 RNF216Q9NWF9 866 aaPredicted RBP27.55■■■□□ 2
SPTSSA-201ENST00000298130 CALM1P0DP23 149 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 CALM2P0DP24 149 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 CALM3P0DP25 149 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 KRT9P35527 623 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 TXLNAP40222 546 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 LONRF2Q1L5Z9 754 aa27.55■■■□□ 2
SPTSSA-201ENST00000298130 RPN1P04843 607 aaKnown RBP27.54■■■□□ 2
SPTSSA-201ENST00000298130 MCM6Q14566 821 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 RCSD1Q6JBY9 416 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 FUT8Q9BYC5 575 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 USP17L3A6NCW0 530 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 USP17L4A6NCW7 530 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 STAT6P42226 847 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 TFAP4Q01664 338 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 PFKFB3Q16875 520 aaPredicted RBP27.54■■■□□ 2
SPTSSA-201ENST00000298130 TCP11X2Q5H9J9 407 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 USP17L1Q7RTZ2 530 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 SRGAP1Q7Z6B7 1085 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 CNGA4Q8IV77 575 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 TMEM60Q9H2L4 133 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 ANKZF1Q9H8Y5 726 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 CACNA1SQ13698 1873 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 TBC1D9BQ66K14 1250 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 SLC44A5Q8NCS7 719 aa27.54■■■□□ 2
SPTSSA-201ENST00000298130 MYH13Q9UKX3 1938 aa27.53■■■□□ 2
SPTSSA-201ENST00000298130 CDC23Q9UJX2 597 aa27.53■■■□□ 2
SPTSSA-201ENST00000298130 PLCH1Q4KWH8 1693 aa27.53■■■□□ 2
SPTSSA-201ENST00000298130 GTPBP6O43824 516 aaPredicted RBP27.53■■■□□ 2
SPTSSA-201ENST00000298130 BMP15O95972 392 aa27.53■■■□□ 2
SPTSSA-201ENST00000298130 GOLGA8HP0CJ92 632 aa27.53■■■□□ 2
SPTSSA-201ENST00000298130 GPIHBP1Q8IV16 184 aa27.53■■■□□ 2
SPTSSA-201ENST00000298130 CRNKL1Q9BZJ0 848 aaKnown RBP27.53■■■□□ 2
SPTSSA-201ENST00000298130 SRP68Q9UHB9 627 aaKnown RBP27.53■■■□□ 2
SPTSSA-201ENST00000298130 DOT1LQ8TEK3 1739 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 FGRP09769 529 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 CYP2C19P33261 490 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 PTF1AQ7RTS3 328 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 GUCA1BQ9UMX6 200 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 ENC1O14682 589 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 INF2Q27J81 1249 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 NCAPH2Q6IBW4 605 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 BLIDQ8IZY5 108 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 NAA15Q9BXJ9 866 aaKnown RBP27.52■■■□□ 2
SPTSSA-201ENST00000298130 IL17RBQ9NRM6 502 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 RWDD2AQ9UIY3 292 aa27.52■■■□□ 2
SPTSSA-201ENST00000298130 CTAGE9A4FU28 777 aa27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 H3BQF6 201 aa27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 LINC00116Q8NCU8 138 aa27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 LIMA1Q9UHB6 759 aaKnown RBP27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 ZNF652Q9Y2D9 606 aa27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 NUTM2BA6NNL0 878 aaPredicted RBP27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 NUTM2EB1AL46 878 aaPredicted RBP27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 HIBADHP31937 336 aaKnown RBP27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 IRF2BP1Q8IU81 584 aa27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 KAT14Q9H8E8 782 aa27.51■■□□□ 1.99
SPTSSA-201ENST00000298130 MYH8P13535 1937 aa27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 ARHGAP25P42331 645 aa27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 FBXO33Q7Z6M2 555 aa27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 LRRC15Q8TF66 581 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms