RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 COA1Q9GZY4 146 aa10.62□□□□□ -0.71
CLRN1-201ENST00000295911 JAG2Q9Y219 1238 aa10.62□□□□□ -0.71
CLRN1-201ENST00000295911 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
CLRN1-201ENST00000295911 SMTNL1A8MU46 457 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 AP5Z1O43299 807 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 PTPREP23469 700 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 BTDP43251 543 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 TOB1P50616 345 aaPredicted RBP10.61□□□□□ -0.71
CLRN1-201ENST00000295911 ZNF75DP51815 510 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 MFSD14BQ5SR56 506 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 KANK3Q6NY19 840 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 SHC4Q6S5L8 630 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 CMTR1Q8N1G2 835 aaKnown RBP10.61□□□□□ -0.71
CLRN1-201ENST00000295911 TGFBRAP1Q8WUH2 860 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 CCDC34Q96HJ3 373 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 LZTS2Q9BRK4 669 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 SH3GLB2Q9NR46 395 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 POLLQ9UGP5 575 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 KCNH3Q9ULD8 1083 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 SRPRBQ9Y5M8 271 aaKnown RBP10.61□□□□□ -0.71
CLRN1-201ENST00000295911 GAKO14976 1311 aa10.61□□□□□ -0.71
CLRN1-201ENST00000295911 TRIM75PA6NK02 468 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 UBE2Q2LH0YL09 131 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 PLEKHA8P1O95397 391 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 TSPY3P0CV98 308 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 TSPY8P0CW00 308 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 SCG2P13521 617 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 CALML3P27482 149 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 PFKFB3Q16875 520 aaPredicted RBP10.6□□□□□ -0.71
CLRN1-201ENST00000295911 RCSD1Q6JBY9 416 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 C11orf57Q6ZUT1 292 aaPredicted RBP10.6□□□□□ -0.71
CLRN1-201ENST00000295911 DRC7Q8IY82 874 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 TEX11Q8IYF3 940 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 SRBD1Q8N5C6 995 aaKnown RBP10.6□□□□□ -0.71
CLRN1-201ENST00000295911 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 ZC3H12CQ9C0D7 883 aaKnown RBP10.6□□□□□ -0.71
CLRN1-201ENST00000295911 CABP5Q9NP86 173 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
CLRN1-201ENST00000295911 CNTNAP5Q8WYK1 1306 aa10.6□□□□□ -0.71
CLRN1-201ENST00000295911 NMT2O60551 498 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 APBA3O96018 575 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 SRGNP10124 158 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 TRAPPC10P48553 1259 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 TERF1P54274 439 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 NR5A1Q13285 461 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 GRM4Q14833 912 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 GRIK5Q16478 980 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 C16orf86Q6ZW13 317 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 DHX40Q8IX18 779 aaKnown RBP10.59□□□□□ -0.71
CLRN1-201ENST00000295911 MPNDQ8N594 471 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 FERMT2Q96AC1 680 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 MRFAP1L1Q96HT8 127 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
CLRN1-201ENST00000295911 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 TUBE1Q9UJT0 475 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 FBXO2Q9UK22 296 aaPredicted RBP10.59□□□□□ -0.71
CLRN1-201ENST00000295911 VPS9D1Q9Y2B5 631 aa10.59□□□□□ -0.71
CLRN1-201ENST00000295911 MYO1BO43795 1136 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 NLRP5P59047 1200 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
CLRN1-201ENST00000295911 GALNT17Q6IS24 598 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 KRBA2Q6ZNG9 492 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 COL23A1Q86Y22 540 aaPredicted RBP10.58□□□□□ -0.72
CLRN1-201ENST00000295911 MAPKAPK5Q8IW41 473 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 CNNM3Q8NE01 707 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 NEDD1Q8NHV4 660 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 MASTLQ96GX5 879 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 CLIC6Q96NY7 704 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 EYA3Q99504 573 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 IL17RBQ9NRM6 502 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 PCDHB6Q9Y5E3 794 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
CLRN1-201ENST00000295911 IKBKBO14920 756 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 NEMFO60524 1076 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 RASA1P20936 1047 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 CDK8P49336 464 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 GTF2IP78347 998 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 AOPEPQ8N6M6 819 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 SPC24Q8NBT2 197 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 TNFRSF25Q93038 417 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 DYNLL2Q96FJ2 89 aa10.58□□□□□ -0.72
CLRN1-201ENST00000295911 PYM1Q9BRP8 204 aaKnown RBP10.58□□□□□ -0.72
CLRN1-201ENST00000295911 TNS1Q9HBL0 1735 aaKnown RBP10.57□□□□□ -0.72
CLRN1-201ENST00000295911 FLT1P17948 1338 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 PLCD1P51178 756 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 RHBDL3P58872 404 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 ZNF827Q17R98 1081 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 LONRF3Q496Y0 759 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 TTC38Q5R3I4 469 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 DPP8Q6V1X1 898 aaPredicted RBP10.57□□□□□ -0.72
CLRN1-201ENST00000295911 CCDC148Q8NFR7 591 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms