RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 CALM2P0DP24 149 aa32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 CALM3P0DP25 149 aa32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 GRM4Q14833 912 aa32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 CCDC96Q2M329 555 aa32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 TREML2Q5T2D2 321 aa32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 ZNF274Q96GC6 653 aaPredicted RBP32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 RLFQ13129 1914 aa32.38■■■□□ 2.77
CHCHD4-201ENST00000295767 FRMPD2Q68DX3 1309 aaPredicted RBP32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 LARGE1O95461 756 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 BMP3P12645 472 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 ZNF543Q08ER8 600 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 KCTD1Q719H9 257 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 ZIC5Q96T25 663 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 RPAP3Q9H6T3 665 aaPredicted RBP32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 LIMCH1Q9UPQ0 1083 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 MANSC4A6NHS7 340 aaPredicted RBP32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 GOLGA8HP0CJ92 632 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 RCAN1P53805 252 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 MAP3K14Q99558 947 aa32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 ISY1Q9ULR0 285 aaKnown RBP32.37■■■□□ 2.77
CHCHD4-201ENST00000295767 GOLGA8AA7E2F4 631 aa32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 PARP1P09874 1014 aaKnown RBP32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 STK3Q13188 491 aa32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 NOGQ13253 232 aa32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 GPAT2Q6NUI2 795 aa32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 MAD2L2Q9UI95 211 aa32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 AGTPBP1Q9UPW5 1226 aa32.36■■■□□ 2.77
CHCHD4-201ENST00000295767 NID2Q14112 1375 aa32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 TESPA1A2RU30 521 aaPredicted RBP32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 AOC2O75106 756 aa32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 METAP2P50579 478 aaKnown RBP eCLIP32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 ME3Q16798 604 aa32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 STAG2Q8N3U4 1231 aa32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 FANCBQ8NB91 859 aa32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 CTCFLQ8NI51 663 aaPredicted RBP32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 GPCPD1Q9NPB8 672 aa32.35■■■□□ 2.77
CHCHD4-201ENST00000295767 THSD7BQ9C0I4 1608 aa32.34■■■□□ 2.77
CHCHD4-201ENST00000295767 WDR33Q9C0J8 1336 aaKnown RBP32.34■■■□□ 2.77
CHCHD4-201ENST00000295767 ASPRV1Q53RT3 343 aa32.34■■■□□ 2.77
CHCHD4-201ENST00000295767 PALM3A6NDB9 673 aaPredicted RBP32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 MCM2P49736 904 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 VEGFBP49765 207 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 KIF23Q02241 960 aaPredicted RBP32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 RTN1Q16799 776 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 GPATCH4Q5T3I0 446 aaKnown RBP32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 PTPN18Q99952 460 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 TANGO6Q9C0B7 1094 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 KIF5BP33176 963 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 CCT2P78371 535 aaKnown RBP32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 TTBK2Q6IQ55 1244 aa32.33■■■□□ 2.77
CHCHD4-201ENST00000295767 BTBD19C9JJ37 291 aa32.32■■■□□ 2.76
CHCHD4-201ENST00000295767 TMEM232C9JQI7 657 aa32.32■■■□□ 2.76
CHCHD4-201ENST00000295767 CDC27P30260 824 aa32.32■■■□□ 2.76
CHCHD4-201ENST00000295767 SLKQ9H2G2 1235 aaPredicted RBP32.32■■■□□ 2.76
CHCHD4-201ENST00000295767 NCOA5Q9HCD5 579 aaKnown RBP32.32■■■□□ 2.76
CHCHD4-201ENST00000295767 FAM217BQ9NTX9 383 aaPredicted RBP32.32■■■□□ 2.76
CHCHD4-201ENST00000295767 BAZ2BQ9UIF8 2168 aaKnown RBP32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L15C9J2P7 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L13C9JLJ4 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L11C9JVI0 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L18D6R9N7 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L22D6RA61 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L17D6RBQ6 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L19D6RCP7 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L20D6RJB6 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 PFKFB2O60825 505 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 USP17L24Q0WX57 530 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 TSHZ2Q9NRE2 1034 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 FBXO28Q9NVF7 368 aa32.31■■■□□ 2.76
CHCHD4-201ENST00000295767 HOXA7P31268 230 aaPredicted RBP32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 SREBF2Q12772 1141 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 CATSPERGQ6ZRH7 1159 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 ANKRD23Q86SG2 305 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 FAM43AQ8N2R8 423 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 NECAB1Q8N987 351 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 SNX21Q969T3 373 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 ZSCAN31Q96LW9 406 aaPredicted RBP32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 CPVLQ9H3G5 476 aa32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 COL11A1P12107 1806 aaPredicted RBP32.3■■■□□ 2.76
CHCHD4-201ENST00000295767 KLRF2D3W0D1 207 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 INHBEP58166 350 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 SCRN1Q12765 414 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 RBM28Q9NW13 759 aaKnown RBP32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 MYH6P13533 1939 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 IGF2BP3O00425 579 aaKnown RBP eCLIP32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 PLEKHA8P1O95397 391 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 ADD1P35611 737 aaKnown RBP32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 SLC16A2P36021 539 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 STAT2P52630 851 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 FEM1BQ9UK73 627 aa32.29■■■□□ 2.76
CHCHD4-201ENST00000295767 FLOT1O75955 427 aa32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 IKQ13123 557 aaPredicted RBP32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 PABPC4Q13310 644 aaKnown RBP eCLIP32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 PPP2R5BQ15173 497 aa32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 GTF3C6Q969F1 213 aa32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 TMX3Q96JJ7 454 aa32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 UBA5Q9GZZ9 404 aa32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 SH2B1Q9NRF2 756 aaPredicted RBP32.28■■■□□ 2.76
CHCHD4-201ENST00000295767 PDHXO00330 501 aa32.27■■■□□ 2.76
CHCHD4-201ENST00000295767 PLA2G6O60733 806 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms