RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 HELLSQ9NRZ9 838 aa11.37□□□□□ -0.59
CLDN1-201ENST00000295522 MAGEC2Q9UBF1 373 aaPredicted RBP11.37□□□□□ -0.59
CLDN1-201ENST00000295522 RIMS1Q86UR5 1692 aaKnown RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 EME2A4GXA9 379 aaPredicted RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 UPP2O95045 317 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 ERCC5P28715 1186 aaPredicted RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 DDR1Q08345 913 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 TMEM67Q5HYA8 995 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 ARMC3Q5W041 872 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 ZNF594Q96JF6 807 aaPredicted RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 EPB41L5Q9HCM4 733 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 INCENPQ9NQS7 918 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 RBM28Q9NW13 759 aaKnown RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 TARSL2A2RTX5 802 aaKnown RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 TMOD1P28289 359 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 LTKP29376 864 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 SPATS2Q86XZ4 545 aaKnown RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 PARD3BQ8TEW8 1205 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 FAM167BQ9BTA0 163 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 MLXIPQ9HAP2 919 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 LRWD1Q9UFC0 647 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 ZC3H4Q9UPT8 1303 aaKnown RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 C21orf2O43822 256 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 TACC1O75410 805 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 MOCS3O95396 460 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 IRX1P78414 480 aaPredicted RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 PTGISQ16647 500 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 OR2W6PQ8NHA6 318 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 CCDC42Q96M95 316 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 ANGEL1Q9UNK9 670 aaKnown RBP11.36□□□□□ -0.59
CLDN1-201ENST00000295522 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
CLDN1-201ENST00000295522 KDRP35968 1356 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
CLDN1-201ENST00000295522 IRF6O14896 467 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 BUB1O43683 1085 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 NSMCE1Q8WV22 266 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 NELFBQ8WX92 580 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 PLIN2Q99541 437 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 STIM2Q9P246 746 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
CLDN1-201ENST00000295522 L3MBTL1Q9Y468 752 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 IGSF1Q8N6C5 1336 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 TRIM49BA6NDI0 452 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 AKR1B10O60218 316 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 HOXC9P31274 260 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 ZMYM1Q5SVZ6 1142 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
CLDN1-201ENST00000295522 KLHL7Q8IXQ5 586 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 SPATA4Q8NEY3 305 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 STAMBPL1Q96FJ0 436 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 MAP3K14Q99558 947 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 SH3GL2Q99962 352 aa11.35□□□□□ -0.59
CLDN1-201ENST00000295522 SMIM23A6NLE4 172 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 PSMD14O00487 310 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 SLC8A1P32418 973 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 PTPN12Q05209 780 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 KCNB1Q14721 858 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 CACNA2D3Q8IZS8 1091 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 AENQ8WTP8 325 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 MS4A14Q96JA4 679 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 USO1O60763 962 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 HEXIM1O94992 359 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 FAM153BP0C7A2 387 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 PAK1Q13153 545 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 SNX1Q13596 522 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 GCKRQ14397 625 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 ZNF174Q15697 407 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 FAM153CQ494X1 144 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 FAM153AQ9UHL3 310 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 ANTXR2P58335 489 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 HERVK_113P62684 666 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 TRIML1Q8N9V2 468 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
CLDN1-201ENST00000295522 SAAL1Q96ER3 474 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 SH3TC1Q8TE82 1336 aa11.34□□□□□ -0.59
CLDN1-201ENST00000295522 MDM2Q00987 491 aaPredicted RBP11.33□□□□□ -0.6
CLDN1-201ENST00000295522 FAM133BQ5BKY9 247 aaKnown RBP11.33□□□□□ -0.6
CLDN1-201ENST00000295522 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
CLDN1-201ENST00000295522 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms