RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 STK10O94804 968 aaKnown RBP11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 IRX4P78413 519 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 TAF12Q16514 161 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 CASC4Q6P4E1 433 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 VTI1AQ96AJ9 217 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 FAF1Q9UNN5 650 aaPredicted RBP11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 SLIT1O75093 1534 aa11.87□□□□□ -0.51
PKNOX1-201ENST00000291547 CYP2C19P33261 490 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 FBXO18Q8NFZ0 1043 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 B4DLN1 442 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CLTAP09496 248 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SLC8A1P32418 973 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 MRPL12P52815 198 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 DCUN1D2Q6PH85 259 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 PIK3AP1Q6ZUJ8 805 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SPATS2Q86XZ4 545 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CCDC117Q8IWD4 279 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 NCOA5Q9HCD5 579 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 PKD2L1Q9P0L9 805 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 DEXIO95424 95 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SLC8A3P57103 927 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 TFCP2Q12800 502 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 RNF34Q969K3 372 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 RAB17Q9H0T7 212 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CCDC169A6NNP5 214 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 PPFIA2O75334 1257 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 RFC4P35249 363 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SESN3P58005 492 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 IRX1P78414 480 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 SUFUQ9UMX1 484 aa11.86□□□□□ -0.51
PKNOX1-201ENST00000291547 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 XPO4Q9C0E2 1151 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 WDR70Q9NW82 654 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 SPATA31A3Q5VYP0 1347 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 SIGLEC1Q9BZZ2 1709 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 HERC4Q5GLZ8 1057 aaPredicted RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 CLEC17AQ6ZS10 378 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 CFAP61Q8NHU2 1237 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 CAPS2Q9BXY5 557 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 XAB2Q9HCS7 855 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 B4E1Z4 1266 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 TXKP42681 527 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 LRRC43Q8N309 656 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 MED14O60244 1454 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 CALUO43852 315 aaPredicted RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 PLCG2P16885 1265 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 SMTNP53814 917 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 ATP2A3Q93084 1043 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 DONSONQ9NYP3 566 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 C1orf167Q5SNV9 1468 aa11.85□□□□□ -0.51
PKNOX1-201ENST00000291547 CHL1O00533 1208 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 WDR46O15213 610 aaKnown RBP11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 SLFN14P0C7P3 912 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 ADKP55263 362 aaKnown RBP11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 TRIM6Q9C030 488 aaPredicted RBP11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 PFDN1O60925 122 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 LONRF2Q1L5Z9 754 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 SFMBT2Q5VUG0 894 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 P3H4Q92791 437 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 FAM207AQ9NSI2 230 aaPredicted RBP11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
PKNOX1-201ENST00000291547 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms