RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 RASEFQ8IZ41 740 aa31.61■■■□□ 2.65
SSU72-201ENST00000291386 CD99L2Q8TCZ2 262 aa31.61■■■□□ 2.65
SSU72-201ENST00000291386 NUP88Q99567 741 aaPredicted RBP31.61■■■□□ 2.65
SSU72-201ENST00000291386 USP26Q9BXU7 913 aa31.61■■■□□ 2.65
SSU72-201ENST00000291386 ADAMTS5Q9UNA0 930 aa31.61■■■□□ 2.65
SSU72-201ENST00000291386 SLC1A4P43007 532 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 KRT32Q14532 448 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 KIF22Q14807 665 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 ARHGEF6Q15052 776 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 DCAF4Q8WV16 495 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 TXNRD2Q9NNW7 524 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 FEM1BQ9UK73 627 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 PPP1R9AQ9ULJ8 1098 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 MGAMO43451 1857 aa31.6■■■□□ 2.65
SSU72-201ENST00000291386 MCCP23508 829 aa31.59■■■□□ 2.65
SSU72-201ENST00000291386 ANTXR2P58335 489 aa31.59■■■□□ 2.65
SSU72-201ENST00000291386 CTU1Q7Z7A3 348 aaKnown RBP31.59■■■□□ 2.65
SSU72-201ENST00000291386 MB21D1Q8N884 522 aa31.59■■■□□ 2.65
SSU72-201ENST00000291386 GPRC5AQ8NFJ5 357 aa31.59■■■□□ 2.65
SSU72-201ENST00000291386 PLA2G6O60733 806 aa31.58■■■□□ 2.65
SSU72-201ENST00000291386 CNMDO75829 334 aa31.58■■■□□ 2.65
SSU72-201ENST00000291386 SNHG28P0DPA3 235 aa31.58■■■□□ 2.65
SSU72-201ENST00000291386 MCM5P33992 734 aa31.58■■■□□ 2.65
SSU72-201ENST00000291386 CAP1Q01518 475 aa31.58■■■□□ 2.65
SSU72-201ENST00000291386 KAT14Q9H8E8 782 aa31.58■■■□□ 2.65
SSU72-201ENST00000291386 GNRH1P01148 92 aa31.57■■■□□ 2.64
SSU72-201ENST00000291386 ERVK-9P63128 1117 aa31.57■■■□□ 2.64
SSU72-201ENST00000291386 ERVK-24P63145 666 aa31.57■■■□□ 2.64
SSU72-201ENST00000291386 SART3Q15020 963 aaKnown RBP31.57■■■□□ 2.64
SSU72-201ENST00000291386 COL13A1Q5TAT6 717 aaPredicted RBP31.57■■■□□ 2.64
SSU72-201ENST00000291386 PRPF38AQ8NAV1 312 aaKnown RBP31.57■■■□□ 2.64
SSU72-201ENST00000291386 SLF1Q9BQI6 1058 aa31.57■■■□□ 2.64
SSU72-201ENST00000291386 FBXO28Q9NVF7 368 aa31.57■■■□□ 2.64
SSU72-201ENST00000291386 IFIT3O14879 490 aaKnown RBP31.56■■■□□ 2.64
SSU72-201ENST00000291386 PDHBP11177 359 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 CTGFP29279 349 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 IFIT1BQ5T764 474 aaKnown RBP31.56■■■□□ 2.64
SSU72-201ENST00000291386 PNMA1Q8ND90 353 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 IGDCC4Q8TDY8 1250 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 ATG4CQ96DT6 458 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 NEK1Q96PY6 1258 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 BTBD7Q9P203 1132 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 ZSWIM8A7E2V4 1837 aa31.56■■■□□ 2.64
SSU72-201ENST00000291386 ERICH2A1L162 156 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 Q3C1V9 767 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 FAM160B2Q86V87 743 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 PAGR1Q9BTK6 254 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 ARHGAP39Q9C0H5 1083 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 EFCC1Q9HA90 598 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 SNX14Q9Y5W7 946 aa31.55■■■□□ 2.64
SSU72-201ENST00000291386 WDR19Q8NEZ3 1342 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 TMEM232C9JQI7 657 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 PSMC4P43686 418 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 FCGRTP55899 365 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 ADCK5Q3MIX3 580 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 CHST3Q7LGC8 479 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 OTOP1Q7RTM1 612 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 CHURC1Q8WUH1 139 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 TMEM87BQ96K49 555 aa31.54■■■□□ 2.64
SSU72-201ENST00000291386 COL11A1P12107 1806 aaPredicted RBP31.54■■■□□ 2.64
SSU72-201ENST00000291386 VWA5AO00534 786 aa31.53■■■□□ 2.64
SSU72-201ENST00000291386 PRC1O43663 620 aa31.53■■■□□ 2.64
SSU72-201ENST00000291386 PEX10O60683 326 aa31.53■■■□□ 2.64
SSU72-201ENST00000291386 STAT2P52630 851 aa31.53■■■□□ 2.64
SSU72-201ENST00000291386 WTAPQ15007 396 aa31.53■■■□□ 2.64
SSU72-201ENST00000291386 PKN2Q16513 984 aaKnown RBP31.53■■■□□ 2.64
SSU72-201ENST00000291386 TRIM47Q96LD4 638 aa31.53■■■□□ 2.64
SSU72-201ENST00000291386 HMGB1P09429 215 aaKnown RBP31.52■■■□□ 2.64
SSU72-201ENST00000291386 FDX1P10109 184 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 CCNA1P78396 465 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 COL9A3Q14050 684 aaPredicted RBP31.52■■■□□ 2.64
SSU72-201ENST00000291386 TMEM67Q5HYA8 995 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 BTNL9Q6UXG8 535 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 KCTD1Q719H9 257 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 RASGRP2Q7LDG7 609 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 REPS2Q8NFH8 660 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 TRIM17Q9Y577 477 aa31.52■■■□□ 2.64
SSU72-201ENST00000291386 EXOSC10Q01780 885 aaKnown RBP31.51■■■□□ 2.63
SSU72-201ENST00000291386 ZNF543Q08ER8 600 aa31.51■■■□□ 2.63
SSU72-201ENST00000291386 DHX32Q7L7V1 743 aaKnown RBP31.51■■■□□ 2.63
SSU72-201ENST00000291386 MTMR7Q9Y216 660 aa31.51■■■□□ 2.63
SSU72-201ENST00000291386 FMNL1O95466 1100 aaPredicted RBP31.5■■■□□ 2.63
SSU72-201ENST00000291386 PRMT2P55345 433 aa31.5■■■□□ 2.63
SSU72-201ENST00000291386 CCDC96Q2M329 555 aa31.5■■■□□ 2.63
SSU72-201ENST00000291386 C8orf34Q49A92 452 aa31.5■■■□□ 2.63
SSU72-201ENST00000291386 GPATCH4Q5T3I0 446 aaKnown RBP31.5■■■□□ 2.63
SSU72-201ENST00000291386 TMTC2Q8N394 836 aa31.5■■■□□ 2.63
SSU72-201ENST00000291386 LY9Q9HBG7 655 aa31.5■■■□□ 2.63
SSU72-201ENST00000291386 SH2B2O14492 632 aaPredicted RBP31.49■■■□□ 2.63
SSU72-201ENST00000291386 HOXD10P28358 340 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 MAPK4P31152 587 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 LIFRP42702 1097 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 TMEM132BQ14DG7 1078 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 KIFC2Q96AC6 838 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 SPATC1LQ9H0A9 340 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 SLC38A10Q9HBR0 1119 aa31.49■■■□□ 2.63
SSU72-201ENST00000291386 ATP2A1O14983 1001 aa31.48■■■□□ 2.63
SSU72-201ENST00000291386 SHCBP1Q8NEM2 672 aa31.48■■■□□ 2.63
SSU72-201ENST00000291386 SENP2Q9HC62 589 aa31.48■■■□□ 2.63
SSU72-201ENST00000291386 ZNF214Q9UL59 606 aaPredicted RBP31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms