RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 USP17L13C9JLJ4 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L11C9JVI0 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L18D6R9N7 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L22D6RA61 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L17D6RBQ6 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L19D6RCP7 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L20D6RJB6 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 WDR46O15213 610 aaKnown RBP17.99■□□□□ 0.47
NCK1-201ENST00000288986 TBC1D8O95759 1140 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
NCK1-201ENST00000288986 USP17L24Q0WX57 530 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 SEC23AQ15436 765 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 ANKS1AQ92625 1134 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
NCK1-201ENST00000288986 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
NCK1-201ENST00000288986 CA12O43570 354 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 SLC1A4P43007 532 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 SMCR8Q8TEV9 937 aaPredicted RBP17.98■□□□□ 0.47
NCK1-201ENST00000288986 TMEM87BQ96K49 555 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 PARK7Q99497 189 aaKnown RBP17.98■□□□□ 0.47
NCK1-201ENST00000288986 ASCC2Q9H1I8 757 aaPredicted RBP17.98■□□□□ 0.47
NCK1-201ENST00000288986 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
NCK1-201ENST00000288986 FGD1P98174 961 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 EXOSC10Q01780 885 aaKnown RBP17.98■□□□□ 0.47
NCK1-201ENST00000288986 CRHR2Q13324 411 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
NCK1-201ENST00000288986 CATSPERGQ6ZRH7 1159 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 MTA3Q9BTC8 594 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 TSKSQ9UJT2 592 aa17.98■□□□□ 0.47
NCK1-201ENST00000288986 MYH4Q9Y623 1939 aa17.97■□□□□ 0.47
NCK1-201ENST00000288986 INTS4Q96HW7 963 aaKnown RBP17.97■□□□□ 0.47
NCK1-201ENST00000288986 SENP2Q9HC62 589 aa17.97■□□□□ 0.47
NCK1-201ENST00000288986 GPHNQ9NQX3 736 aaPredicted RBP17.97■□□□□ 0.47
NCK1-201ENST00000288986 SAGE1Q9NXZ1 904 aa17.97■□□□□ 0.47
NCK1-201ENST00000288986 CHMP5Q9NZZ3 219 aa17.97■□□□□ 0.47
NCK1-201ENST00000288986 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
NCK1-201ENST00000288986 FLOT1O75955 427 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 BMP3P12645 472 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 RASGRP2Q7LDG7 609 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 TMTC2Q8N394 836 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 GMCL1Q96IK5 515 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 P2RX7Q99572 595 aaKnown RBP17.96■□□□□ 0.47
NCK1-201ENST00000288986 SH2B2O14492 632 aaPredicted RBP17.96■□□□□ 0.47
NCK1-201ENST00000288986 HSP90AA1P07900 732 aaKnown RBP17.96■□□□□ 0.47
NCK1-201ENST00000288986 HSPA1AP0DMV8 641 aaKnown RBP17.96■□□□□ 0.47
NCK1-201ENST00000288986 HSPA1BP0DMV9 641 aaKnown RBP17.96■□□□□ 0.47
NCK1-201ENST00000288986 COG2Q14746 738 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 KCTD1Q719H9 257 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 R3HDMLQ9H3Y0 253 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 LY9Q9HBG7 655 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 HOXC10Q9NYD6 342 aa17.96■□□□□ 0.47
NCK1-201ENST00000288986 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
NCK1-201ENST00000288986 LOC285556D6RIA3 1793 aa17.95■□□□□ 0.46
NCK1-201ENST00000288986 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
NCK1-201ENST00000288986 TLR2O60603 784 aa17.95■□□□□ 0.46
NCK1-201ENST00000288986 PDHBP11177 359 aa17.95■□□□□ 0.46
NCK1-201ENST00000288986 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
NCK1-201ENST00000288986 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
NCK1-201ENST00000288986 TMEM232C9JQI7 657 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 LIFRP42702 1097 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 HERVK_113P62684 666 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
NCK1-201ENST00000288986 TOB2Q14106 344 aaPredicted RBP17.94■□□□□ 0.46
NCK1-201ENST00000288986 ANKRD1Q15327 319 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 Q6ZUG5 572 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 CATIPQ7Z7H3 387 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 FBXL16Q8N461 479 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 DCAF4Q8WV16 495 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
NCK1-201ENST00000288986 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 FBXO28Q9NVF7 368 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 CPA4Q9UI42 421 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
NCK1-201ENST00000288986 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
NCK1-201ENST00000288986 FOXN1O15353 648 aa17.93■□□□□ 0.46
NCK1-201ENST00000288986 NUP133Q8WUM0 1156 aa17.93■□□□□ 0.46
NCK1-201ENST00000288986 SH2B1Q9NRF2 756 aaPredicted RBP17.93■□□□□ 0.46
NCK1-201ENST00000288986 GOLGA8HP0CJ92 632 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 STAT2P52630 851 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 NOL8Q76FK4 1167 aaKnown RBP17.92■□□□□ 0.46
NCK1-201ENST00000288986 ANKRD13CQ8N6S4 541 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 SLF1Q9BQI6 1058 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 GPCPD1Q9NPB8 672 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 SLC12A7Q9Y666 1083 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 SPDYE16A6NNV3 312 aaPredicted RBP17.92■□□□□ 0.46
NCK1-201ENST00000288986 LARGE1O95461 756 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 SNHG28P0DPA3 235 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 DSG3P32926 999 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
NCK1-201ENST00000288986 SGMS1Q86VZ5 419 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
NCK1-201ENST00000288986 CHURC1Q8WUH1 139 aa17.92■□□□□ 0.46
NCK1-201ENST00000288986 PAGR1Q9BTK6 254 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms