RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPAG1Q07617 926 aa17.89■□□□□ 0.45
SMAD6-201ENST00000288840 FAM207AQ9NSI2 230 aaPredicted RBP17.89■□□□□ 0.45
SMAD6-201ENST00000288840 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
SMAD6-201ENST00000288840 UBE4AQ14139 1066 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 USP17L2Q6R6M4 530 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 ANKRD13CQ8N6S4 541 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 EIF3JO75822 258 aaKnown RBP17.88■□□□□ 0.45
SMAD6-201ENST00000288840 RPN1P04843 607 aaKnown RBP17.88■□□□□ 0.45
SMAD6-201ENST00000288840 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 TOPAZ1Q8N9V7 1692 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 KLRF2D3W0D1 207 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 LDHCP07864 332 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 BMP6P22004 513 aa17.88■□□□□ 0.45
SMAD6-201ENST00000288840 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.88■□□□□ 0.45
SMAD6-201ENST00000288840 TCRBV5S4A2TA0A5A2 114 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 TFRCP02786 760 aaKnown RBP17.87■□□□□ 0.45
SMAD6-201ENST00000288840 ALX1Q15699 326 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 CCDC40Q4G0X9 1142 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 BPIFA3Q9BQP9 254 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 NOC4LQ9BVI4 516 aaKnown RBP17.87■□□□□ 0.45
SMAD6-201ENST00000288840 SLC39A2Q9NP94 309 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 TFR2Q9UP52 801 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 ZNF804BA4D1E1 1349 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 ABCC12Q96J65 1359 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 PTPROQ16827 1216 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 DNAJC21Q5F1R6 531 aaKnown RBP17.87■□□□□ 0.45
SMAD6-201ENST00000288840 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
SMAD6-201ENST00000288840 ZNF287Q9HBT7 754 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 TCERG1LQ5VWI1 586 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 CCDC42Q96M95 316 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 PARD6BQ9BYG5 372 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 ACBD3Q9H3P7 528 aa17.87■□□□□ 0.45
SMAD6-201ENST00000288840 DCP1AQ9NPI6 582 aaPredicted RBP17.87■□□□□ 0.45
SMAD6-201ENST00000288840 SMCO2A6NFE2 343 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 PARP1P09874 1014 aaKnown RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 COPB1P53618 953 aaKnown RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 KRT31Q15323 416 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 CRACR2AQ9BSW2 395 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 BMP2KQ9NSY1 1161 aaPredicted RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 B4DLN1 442 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 PNMA6AP0CW24 399 aaPredicted RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 NAPGQ99747 312 aaPredicted RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 MRPL44Q9H9J2 332 aaKnown RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 HPSEQ9Y251 543 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 PRPF3O43395 683 aaKnown RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 TMTC3Q6ZXV5 915 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 VGLL2Q8N8G2 317 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 BBXQ8WY36 941 aaPredicted RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 HPS3Q969F9 1004 aa17.86■□□□□ 0.45
SMAD6-201ENST00000288840 RRP36Q96EU6 259 aaKnown RBP17.86■□□□□ 0.45
SMAD6-201ENST00000288840 CD44P16070 742 aaKnown RBP17.85■□□□□ 0.45
SMAD6-201ENST00000288840 GNAQP50148 359 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 CYP27A1Q02318 531 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 CNBD1Q8NA66 436 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 EFCAB8A8MWE9 144 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 CAMTA2O94983 1202 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 TMEM266Q2M3C6 531 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 CABP7Q86V35 215 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 ANKRD2Q9GZV1 360 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 KIF13AQ9H1H9 1805 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 WDR19Q8NEZ3 1342 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 NCAPH2Q6IBW4 605 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 CYP26C1Q6V0L0 522 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 TRIML1Q8N9V2 468 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
SMAD6-201ENST00000288840 EYA3Q99504 573 aa17.85■□□□□ 0.45
SMAD6-201ENST00000288840 A0A0U1RQJ8 604 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 ERCC5P28715 1186 aaPredicted RBP17.84■□□□□ 0.45
SMAD6-201ENST00000288840 CEP112Q8N8E3 955 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 ATRIPQ8WXE1 791 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 TACC3Q9Y6A5 838 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 FXR1P51114 621 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMAD6-201ENST00000288840 TAF3Q5VWG9 929 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 NELFCDQ8IXH7 590 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 RGS22Q8NE09 1264 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
SMAD6-201ENST00000288840 NLRC4Q9NPP4 1024 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 SEPT11Q9NVA2 429 aaKnown RBP17.84■□□□□ 0.45
SMAD6-201ENST00000288840 LMTK3Q96Q04 1460 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 TUBB4AP04350 444 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 FGFR2P21802 821 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 RASGRP2Q7LDG7 609 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 ZNF804AQ7Z570 1209 aa17.84■□□□□ 0.45
SMAD6-201ENST00000288840 A0A087X0B3 334 aa17.83■□□□□ 0.45
SMAD6-201ENST00000288840 WNT7AO00755 349 aa17.83■□□□□ 0.45
SMAD6-201ENST00000288840 TCP10Q12799 353 aa17.83■□□□□ 0.45
SMAD6-201ENST00000288840 LRRC41Q15345 812 aa17.83■□□□□ 0.45
SMAD6-201ENST00000288840 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.45
SMAD6-201ENST00000288840 TMTC1Q8IUR5 882 aa17.83■□□□□ 0.45
SMAD6-201ENST00000288840 CAPN2P17655 700 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 PRCPP42785 496 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 MFSD14BQ5SR56 506 aa17.83■□□□□ 0.44
SMAD6-201ENST00000288840 TYW1BQ6NUM6 668 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms