RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 LSG1Q9H089 658 aaKnown RBP8.09□□□□□ -1.11
SSX2B-201ENST00000288839 KIAA1683Q9H0B3 1180 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 KANSL2Q9H9L4 492 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 ARHGEF10LQ9HCE6 1279 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 ANO2Q9NQ90 1003 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 RBM8AQ9Y5S9 174 aaKnown RBP8.09□□□□□ -1.11
SSX2B-201ENST00000288839 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 RANBP2P49792 3224 aaKnown RBP8.08□□□□□ -1.12
SSX2B-201ENST00000288839 ADGRA2Q96PE1 1338 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 LOC285556D6RIA3 1793 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 B4E1Z4 1266 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 RAD21O60216 631 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
SSX2B-201ENST00000288839 CYP21A2P08686 494 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 FGRP09769 529 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 MFSD6Q6ZSS7 791 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 SPICE1Q8N0Z3 855 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 LRRC47Q8N1G4 583 aaKnown RBP8.08□□□□□ -1.12
SSX2B-201ENST00000288839 ZNF710Q8N1W2 664 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 MAP4K1Q92918 833 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 CHMP4CQ96CF2 233 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 HS3ST6Q96QI5 342 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 ZFYVE28Q9HCC9 887 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 ZCCHC17Q9NP64 241 aaKnown RBP8.08□□□□□ -1.12
SSX2B-201ENST00000288839 MTMR4Q9NYA4 1195 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 CPA4Q9UI42 421 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 GTF3C3Q9Y5Q9 886 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 PLIN4Q96Q06 1357 aa8.08□□□□□ -1.12
SSX2B-201ENST00000288839 TLR2O60603 784 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 PEX10O60683 326 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 KDM4AO75164 1064 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 VCAM1P19320 739 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 USP14P54578 494 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 STOX1Q6ZVD7 989 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 TMC2Q8TDI7 906 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 KHSRPQ92945 711 aaKnown RBP eCLIP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 C12orf42Q96LP6 360 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 PARK7Q99497 189 aaKnown RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 NUP88Q99567 741 aaPredicted RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 RNF41Q9H4P4 317 aaPredicted RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 RPAP3Q9H6T3 665 aaPredicted RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 VCPKMTQ9H867 229 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 NYAP2Q9P242 653 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 SLC45A1Q9Y2W3 748 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 TMX2Q9Y320 296 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 LAMA4Q16363 1823 aa8.07□□□□□ -1.12
SSX2B-201ENST00000288839 GREB1LQ9C091 1923 aaPredicted RBP8.07□□□□□ -1.12
SSX2B-201ENST00000288839 E7EWF7 191 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 SLC27A2O14975 620 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 TTLL1O95922 423 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 NDUFB10O96000 172 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 PCP11498 1178 aaKnown RBP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 OSBPP22059 807 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 HOXA7P31268 230 aaPredicted RBP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 SP3Q02447 781 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 PABPC4Q13310 644 aaKnown RBP eCLIP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 NOM1Q5C9Z4 860 aaKnown RBP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 CREB3L3Q68CJ9 461 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 FBXO46Q6PJ61 603 aaPredicted RBP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 C17orf99Q6UX52 265 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 RASGRP2Q7LDG7 609 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 ANKRD13CQ8N6S4 541 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 SMCR8Q8TEV9 937 aaPredicted RBP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 ESR2Q92731 530 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 P2RX7Q99572 595 aaKnown RBP8.06□□□□□ -1.12
SSX2B-201ENST00000288839 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 SH2D4AQ9H788 454 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 ZSWIM5Q9P217 1185 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 PNMA3Q9UL41 463 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 PTCH2Q9Y6C5 1203 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 LAMA3Q16787 3333 aa8.06□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L13C9JLJ4 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L11C9JVI0 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L18D6R9N7 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L22D6RA61 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L17D6RBQ6 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L19D6RCP7 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L20D6RJB6 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 F5H6K3 240 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 HERVK_113P62684 666 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 KLRC3Q07444 240 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 USP17L24Q0WX57 530 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 COL9A3Q14050 684 aaPredicted RBP8.05□□□□□ -1.12
SSX2B-201ENST00000288839 NECTIN1Q15223 517 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 FAM83BQ5T0W9 1011 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 SLFN13Q68D06 897 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 POTEEQ6S8J3 1075 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 CATSPERGQ6ZRH7 1159 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 CYB5R4Q7L1T6 521 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 SH3TC2Q8TF17 1288 aa8.05□□□□□ -1.12
SSX2B-201ENST00000288839 BBXQ8WY36 941 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms