RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PAFAH1B1P43034 410 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 ARID5AQ03989 594 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 CKAP4Q07065 602 aaKnown RBP15.03■□□□□ -0
SCAF4-201ENST00000286835 RNF187Q5TA31 235 aaPredicted RBP15.03■□□□□ -0
SCAF4-201ENST00000286835 GOLGA6CA6NDK9 693 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 GOLGA6DP0CG33 693 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 KRT83P78385 493 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
SCAF4-201ENST00000286835 RASGRF1Q13972 1273 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 NKX2-3Q8TAU0 364 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 GOLGA6AQ9NYA3 693 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 STX8Q9UNK0 236 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 CPDO75976 1380 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 TNS3Q68CZ2 1445 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
SCAF4-201ENST00000286835 HEATR3Q7Z4Q2 680 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 CSGALNACT2Q8N6G5 542 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 IFT81Q8WYA0 676 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 SEC31BQ9NQW1 1179 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 FANCGO15287 622 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 BMP15O95972 392 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 LIFRP42702 1097 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 CUL4BQ13620 913 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
SCAF4-201ENST00000286835 IPO4Q8TEX9 1081 aaKnown RBP15.03■□□□□ -0
SCAF4-201ENST00000286835 EBAG9O00559 213 aa15.02■□□□□ -0
SCAF4-201ENST00000286835 EPS15P42566 896 aa15.02■□□□□ -0
SCAF4-201ENST00000286835 LIG3P49916 1009 aa15.02■□□□□ -0
SCAF4-201ENST00000286835 FAM71BQ8TC56 605 aa15.02■□□□□ -0
SCAF4-201ENST00000286835 A0A1B0GTH6 734 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 GOLGA6BA6NDN3 693 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 ABL1P00519 1130 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 CXCR5P32302 372 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 GSDMAQ96QA5 445 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 MKNK2Q9HBH9 465 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 ATG3Q9NT62 314 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 ABHD10Q9NUJ1 306 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 BCCIPQ9P287 314 aaKnown RBP eCLIP15.02□□□□□ -0.01
SCAF4-201ENST00000286835 FAM170AA1A519 330 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 GPKOWQ92917 476 aaPredicted RBP eCLIP15.02□□□□□ -0.012e-6■■■□□ 16.4
SCAF4-201ENST00000286835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02□□□□□ -0.01
SCAF4-201ENST00000286835 KCND1Q9NSA2 647 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 EXOC1Q9NV70 894 aa15.02□□□□□ -0.01
SCAF4-201ENST00000286835 B4DLN1 442 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 USP5P45974 858 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 CCT5P48643 541 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 FOXR1Q6PIV2 292 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 DTHD1Q6ZMT9 781 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 RSRC2Q7L4I2 434 aaKnown RBP15.01□□□□□ -0.01
SCAF4-201ENST00000286835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCAF4-201ENST00000286835 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 JCADQ9P266 1359 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 PDE8AO60658 829 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 NDUFA10O95299 355 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 GYPCP04921 128 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 GNAT2P19087 354 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 C2orf54Q08AI8 447 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 HLTFQ14527 1009 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCAF4-201ENST00000286835 ODF2Q5BJF6 829 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 POLD4Q9HCU8 107 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 FAM207AQ9NSI2 230 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-201ENST00000286835 RGPD8O14715 1765 aaPredicted RBP15.01□□□□□ -0.01
SCAF4-201ENST00000286835 RTL9Q8NET4 1388 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 UIMC1Q96RL1 719 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 NOC4LQ9BVI4 516 aaKnown RBP15.01□□□□□ -0.01
SCAF4-201ENST00000286835 TCP11L1Q9NUJ3 509 aa15.01□□□□□ -0.01
SCAF4-201ENST00000286835 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 TYW1BQ6NUM6 668 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 SRLQ86TD4 932 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 EHBP1Q8NDI1 1231 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 CCDC51Q96ER9 411 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 KAT14Q9H8E8 782 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 EPB41L4AQ9HCS5 686 aaPredicted RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 ADD3Q9UEY8 706 aaKnown RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 SOS2Q07890 1332 aaPredicted RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 ACTN4O43707 911 aaKnown RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 RPN1P04843 607 aaKnown RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 GYG1P46976 350 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 TMEM139Q8IV31 216 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 ANKZF1Q9H8Y5 726 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 PIK3C2AO00443 1686 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 USP17L12C9JPN9 530 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 USP17L21D6R901 530 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 TACC1O75410 805 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 PARP1P09874 1014 aaKnown RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 ATP1A2P50993 1020 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 NTRK3Q16288 839 aa15□□□□□ -0.01
SCAF4-201ENST00000286835 QTRT2Q9H974 415 aaKnown RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
SCAF4-201ENST00000286835 FOXP2O15409 715 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 ATP2C2O75185 946 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 DYNLL1P63167 89 aaKnown RBP14.99□□□□□ -0.01
SCAF4-201ENST00000286835 SLC7A5Q01650 507 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 PDE4DQ08499 809 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 TUBB2AQ13885 445 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 E2F4Q16254 413 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 KCTD16Q68DU8 428 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 MAATS1Q7Z4T9 603 aa14.99□□□□□ -0.01
SCAF4-201ENST00000286835 TUBB2BQ9BVA1 445 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms