RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 KRI1Q8N9T8 703 aaKnown RBP8.57□□□□□ -1.04
TRIM6-201ENST00000278302 STAG1Q8WVM7 1258 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
TRIM6-201ENST00000278302 KCNH3Q9ULD8 1083 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 STRCQ7RTU9 1775 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.57□□□□□ -1.04
TRIM6-201ENST00000278302 STK36Q9NRP7 1315 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 CTAGE15A4D2H0 777 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 CTAGE8P0CG41 777 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 RDXP35241 583 aaKnown RBP8.57□□□□□ -1.04
TRIM6-201ENST00000278302 PPARAQ07869 468 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 NEDD9Q14511 834 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 LONRF3Q496Y0 759 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 CTAGE6Q86UF2 777 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 CTAGE4Q8IX94 777 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 SLC35F6Q8N357 371 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 PRPF38AQ8NAV1 312 aaKnown RBP8.57□□□□□ -1.04
TRIM6-201ENST00000278302 SDR42E1Q8WUS8 393 aa8.57□□□□□ -1.04
TRIM6-201ENST00000278302 PNPLA7Q6ZV29 1317 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 KIF5CO60282 957 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 DEXIO95424 95 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 MMP1P03956 469 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 CCDC175P0C221 793 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 MAP2K1Q02750 393 aaPredicted RBP8.56□□□□□ -1.04
TRIM6-201ENST00000278302 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
TRIM6-201ENST00000278302 HPSEQ9Y251 543 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 IKBKBO14920 756 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 NTSR2O95665 410 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 NF2P35240 595 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 GYG1P46976 350 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 RAD9BQ6WBX8 426 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 ANKRD18AQ8IVF6 992 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 ZNF654Q8IZM8 581 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 FANCBQ8NB91 859 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 VEZTQ9HBM0 779 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.56□□□□□ -1.04
TRIM6-201ENST00000278302 TUBE1Q9UJT0 475 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 HPCAL4Q9UM19 191 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 NHSL1Q5SYE7 1610 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 GNGT1P63211 74 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 ITPK1Q13572 414 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 CEP57Q86XR8 500 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 TRMT44Q8IYL2 757 aaKnown RBP8.56□□□□□ -1.04
TRIM6-201ENST00000278302 CRACR2BQ8N4Y2 399 aaPredicted RBP8.56□□□□□ -1.04
TRIM6-201ENST00000278302 FAM76AQ8TAV0 307 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 ESR2Q92731 530 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 ODF2LQ9ULJ1 636 aa8.56□□□□□ -1.04
TRIM6-201ENST00000278302 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 CTAGE9A4FU28 777 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 GOLGA6CA6NDK9 693 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 GOLGA6DP0CG33 693 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 PDE4BQ07343 736 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 CAVIN4Q5BKX8 364 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 RILPL1Q5EBL4 403 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 MSL3Q8N5Y2 521 aaKnown RBP8.55□□□□□ -1.04
TRIM6-201ENST00000278302 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 GOLGA6AQ9NYA3 693 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 MCM8Q9UJA3 840 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 PCDHA5Q9Y5H7 936 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 COL14A1Q05707 1796 aaKnown RBP8.55□□□□□ -1.04
TRIM6-201ENST00000278302 C21orf2O43822 256 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 XBP1P17861 261 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 PPARDQ03181 441 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 NR5A1Q13285 461 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 STIM1Q13586 685 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 SPECC1LQ69YQ0 1117 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 CALR3Q96L12 384 aaKnown RBP8.55□□□□□ -1.04
TRIM6-201ENST00000278302 CAPS2Q9BXY5 557 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 FOXP1Q9H334 677 aaPredicted RBP8.55□□□□□ -1.04
TRIM6-201ENST00000278302 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
TRIM6-201ENST00000278302 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 POLR2DO15514 142 aaKnown RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 FNTAP49354 379 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 TBX2Q13207 712 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 METTL16Q86W50 562 aaKnown RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 OTUD6BQ8N6M0 293 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 CEP120Q8N960 986 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 MARCH10Q8NA82 808 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 ACRBPQ8NEB7 543 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 ZNF526Q8TF50 670 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 DDX60Q8IY21 1712 aaKnown RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 SLIT2O94813 1529 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 TNKSO95271 1327 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 AGPSO00116 658 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 ENC1O14682 589 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 FOXN1O15353 648 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 SHOX2O60902 331 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-201ENST00000278302 MYBL2P10244 700 aa8.54□□□□□ -1.04
TRIM6-201ENST00000278302 TOB1P50616 345 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms