RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 TCP11L2Q8N4U5 519 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 C1orf131Q8NDD1 294 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 SLC12A5Q9H2X9 1139 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 TNS2Q63HR2 1409 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 NRDCO43847 1150 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 RNASEH2AO75792 299 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 IL2RAP01589 272 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 FAM153BP0C7A2 387 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 TFE3P19532 575 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 PDE6BP35913 854 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 GTF2A2P52657 109 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 CBX2Q14781 532 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 LONRF1Q17RB8 773 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 SH3PXD2AQ5TCZ1 1133 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 MZT2AQ6P582 158 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 FRS2Q8WU20 508 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 COG3Q96JB2 828 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 SRRTQ9BXP5 876 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 BCO2Q9BYV7 579 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 KLHL11Q9NVR0 708 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 FOXD3Q9UJU5 478 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 MRVI1Q9Y6F6 885 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 KCPQ6ZWJ8 1503 aa3.46□□□□□ -1.85
HERC4-201ENST00000277817 HMMRO75330 724 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 LMOD3Q0VAK6 560 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 TUBB8Q3ZCM7 444 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 PERM1Q5SV97 790 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 SLC9A9Q8IVB4 645 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 ZSCAN18Q8TBC5 510 aaPredicted RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 CHAC2Q8WUX2 184 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 EXOC2Q96KP1 924 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 NEUROD6Q96NK8 337 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 AKAP2Q9Y2D5 859 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 ARHGEF10O15013 1369 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 A0A0U1RQG5 324 aaPredicted RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 CILPO75339 1184 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 HRGP04196 525 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 PWP1Q13610 501 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 CCDC96Q2M329 555 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 OSBPL5Q9H0X9 879 aaPredicted RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 RETREG1Q9H6L5 497 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 C19orf44Q9H6X5 657 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 TRIM39Q9HCM9 518 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 ABCB6Q9NP58 842 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 CRTAC1Q9NQ79 661 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 ZIM2Q9NZV7 527 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 PLD2O14939 933 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 FOSP01100 380 aaPredicted RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 HOXD8P13378 290 aaPredicted RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 HMGB2P26583 209 aaKnown RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 PUS10Q3MIT2 529 aaKnown RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 IER5Q5VY09 327 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 ZBTB38Q8NAP3 1195 aaPredicted RBP3.46□□□□□ -1.86
HERC4-201ENST00000277817 RILPL2Q969X0 211 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 DDX19BQ9UMR2 479 aa3.46□□□□□ -1.86
HERC4-201ENST00000277817 SNED1Q8TER0 1413 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 SPATA31A3Q5VYP0 1347 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 TRPM7Q96QT4 1865 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 BACH1O14867 736 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 PDE8AO60658 829 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 TCEA3O75764 348 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 LMNB1P20700 586 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 NXPE4Q6UWF7 544 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 NUDT12Q9BQG2 462 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 IFT122Q9HBG6 1241 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 SALL4Q9UJQ4 1053 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 CNOT4O95628 575 aaKnown RBP3.45□□□□□ -1.86
HERC4-201ENST00000277817 GNRH1P01148 92 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 SDSP20132 328 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 NFKBIBQ15653 356 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 ANKRD23Q86SG2 305 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 SKAP1Q86WV1 359 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 DRC7Q8IY82 874 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 NGEFQ8N5V2 710 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 FOXJ1Q92949 421 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 TCF12Q99081 682 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 C11orf16Q9NQ32 467 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.45□□□□□ -1.86
HERC4-201ENST00000277817 RIC1Q4ADV7 1423 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 KDM2BQ8NHM5 1336 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 HAX1O00165 279 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 SSBP05455 408 aaKnown RBP eCLIP3.45□□□□□ -1.86
HERC4-201ENST00000277817 TSPAN7P41732 249 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 PSMA6P60900 246 aaKnown RBP3.45□□□□□ -1.86
HERC4-201ENST00000277817 TRIM42Q8IWZ5 723 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 RIN3Q8TB24 985 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 KLHL6Q8WZ60 621 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 HOOK2Q96ED9 719 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 AIFM3Q96NN9 605 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 TARS2Q9BW92 718 aaKnown RBP3.45□□□□□ -1.86
HERC4-201ENST00000277817 HCN4Q9Y3Q4 1203 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 OVOS2A0A0J9YW53 1432 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 OVOS2Q6IE36 1432 aa3.45□□□□□ -1.86
HERC4-201ENST00000277817 A6NNZ2 444 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 ERVH48-1M5A8F1 160 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 ENC1O14682 589 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 ST18O60284 1047 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 DNAJC8O75937 253 aaPredicted RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 KRT18P05783 430 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms