RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CLRN2A0PK11 232 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 ASPRV1Q53RT3 343 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 CSRNP1Q96S65 589 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 CABP5Q9NP86 173 aa25.38■■□□□ 1.65
CCDC7-201ENST00000277657 CNTNAP1P78357 1384 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 TCP10L2B9ZVM9 353 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 CALML3P27482 149 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 NLRP5P59047 1200 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 MAP3K11Q16584 847 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 PANK2Q9BZ23 570 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 TNMDQ9H2S6 317 aa25.37■■□□□ 1.65
CCDC7-201ENST00000277657 EARS2Q5JPH6 523 aaKnown RBP25.36■■□□□ 1.65
CCDC7-201ENST00000277657 NLGN2Q8NFZ4 835 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 MKL1Q969V6 931 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 RIOX1Q9H6W3 641 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 KANSL2Q9H9L4 492 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 BARHL2Q9NY43 387 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 HERC5Q9UII4 1024 aaKnown RBP25.36■■□□□ 1.65
CCDC7-201ENST00000277657 CMA1P23946 247 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 MARCKSP29966 332 aaPredicted RBP25.36■■□□□ 1.65
CCDC7-201ENST00000277657 CAMK4Q16566 473 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 WWC2Q6AWC2 1192 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 TMEM179Q6ZVK1 233 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 FMR1NBQ8N0W7 255 aaPredicted RBP25.36■■□□□ 1.65
CCDC7-201ENST00000277657 GPKOWQ92917 476 aaPredicted RBP eCLIP25.36■■□□□ 1.65
CCDC7-201ENST00000277657 NYAP2Q9P242 653 aa25.36■■□□□ 1.65
CCDC7-201ENST00000277657 MORC2Q9Y6X9 1032 aaPredicted RBP25.36■■□□□ 1.65
CCDC7-201ENST00000277657 RPS12P25398 132 aaKnown RBP25.35■■□□□ 1.65
CCDC7-201ENST00000277657 TYW1BQ6NUM6 668 aa25.35■■□□□ 1.65
CCDC7-201ENST00000277657 CPVLQ9H3G5 476 aa25.35■■□□□ 1.65
CCDC7-201ENST00000277657 FAM205CA6NFA0 338 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 PRELPP51888 382 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 ZNF280AP59817 542 aaPredicted RBP25.34■■□□□ 1.65
CCDC7-201ENST00000277657 SHROOM1Q2M3G4 852 aaPredicted RBP25.34■■□□□ 1.65
CCDC7-201ENST00000277657 FAM83AQ86UY5 434 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 PCDHB6Q9Y5E3 794 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 STXBP3O00186 592 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 RASSF7Q02833 373 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 ZNF543Q08ER8 600 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 GALNT17Q6IS24 598 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 DAGLBQ8NCG7 672 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 CCDC148Q8NFR7 591 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 RRP36Q96EU6 259 aaKnown RBP25.34■■□□□ 1.65
CCDC7-201ENST00000277657 MYOZ2Q9NPC6 264 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 PCDHA4Q9UN74 947 aa25.34■■□□□ 1.65
CCDC7-201ENST00000277657 A0A1B0GVL5 298 aa25.33■■□□□ 1.65
CCDC7-201ENST00000277657 WNT10BO00744 389 aa25.33■■□□□ 1.65
CCDC7-201ENST00000277657 ABCB5Q2M3G0 1257 aa25.33■■□□□ 1.65
CCDC7-201ENST00000277657 SIAH1Q8IUQ4 282 aa25.33■■□□□ 1.65
CCDC7-201ENST00000277657 CEP131Q9UPN4 1083 aa25.33■■□□□ 1.65
CCDC7-201ENST00000277657 FZD9O00144 591 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 MYO1BO43795 1136 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 CUTAO60888 179 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 EEF2P13639 858 aaKnown RBP25.32■■□□□ 1.64
CCDC7-201ENST00000277657 NDUFA8P51970 172 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 HEATR3Q7Z4Q2 680 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 BLIDQ8IZY5 108 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 FRMPD2Q68DX3 1309 aaPredicted RBP25.32■■□□□ 1.64
CCDC7-201ENST00000277657 FAM237AA0A1B0GTK4 181 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 TRIM75PA6NK02 468 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 M0R2N6 131 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 CTAGE5O15320 804 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 KINO60870 393 aaKnown RBP25.32■■□□□ 1.64
CCDC7-201ENST00000277657 SEPT2Q15019 361 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 GPATCH4Q5T3I0 446 aaKnown RBP25.32■■□□□ 1.64
CCDC7-201ENST00000277657 UBA5Q9GZZ9 404 aa25.32■■□□□ 1.64
CCDC7-201ENST00000277657 NOL7Q9UMY1 257 aaKnown RBP25.32■■□□□ 1.64
CCDC7-201ENST00000277657 ADAMTS3O15072 1205 aa25.31■■□□□ 1.64
CCDC7-201ENST00000277657 ATP2B2Q01814 1243 aa25.31■■□□□ 1.64
CCDC7-201ENST00000277657 RRP1BQ14684 758 aaKnown RBP25.31■■□□□ 1.64
CCDC7-201ENST00000277657 NOM1Q5C9Z4 860 aaKnown RBP25.31■■□□□ 1.64
CCDC7-201ENST00000277657 KRI1Q8N9T8 703 aaKnown RBP25.31■■□□□ 1.64
CCDC7-201ENST00000277657 PIGSQ96S52 555 aa25.31■■□□□ 1.64
CCDC7-201ENST00000277657 VEZTQ9HBM0 779 aa25.31■■□□□ 1.64
CCDC7-201ENST00000277657 SHTN1A0MZ66 631 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 GDF11O95390 407 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 CCDC192P0DO97 292 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 TRAPPC10P48553 1259 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 NBPF9Q3BBW0 867 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 SHC4Q6S5L8 630 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.3■■□□□ 1.64
CCDC7-201ENST00000277657 SEC63Q9UGP8 760 aaKnown RBP25.3■■□□□ 1.64
CCDC7-201ENST00000277657 PGAP2Q9UHJ9 254 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 HPSEQ9Y251 543 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 PTPREP23469 700 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 JAG1P78504 1218 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 ICA1Q05084 483 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 RBM26Q5T8P6 1007 aaKnown RBP25.3■■□□□ 1.64
CCDC7-201ENST00000277657 RESP18Q5W5W9 173 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 CKAP2LQ8IYA6 745 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 CCDC12Q8WUD4 166 aaPredicted RBP25.3■■□□□ 1.64
CCDC7-201ENST00000277657 DPF2Q92785 391 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 ZMYND12Q9H0C1 365 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 SPON1Q9HCB6 807 aa25.3■■□□□ 1.64
CCDC7-201ENST00000277657 FBXO2Q9UK22 296 aaPredicted RBP25.3■■□□□ 1.64
CCDC7-201ENST00000277657 hCG_1984214I3L0E3 225 aa25.29■■□□□ 1.64
CCDC7-201ENST00000277657 TBC1D12O60347 775 aa25.29■■□□□ 1.64
CCDC7-201ENST00000277657 PFKFB1P16118 471 aa25.29■■□□□ 1.64
CCDC7-201ENST00000277657 HOMER1Q86YM7 354 aa25.29■■□□□ 1.64
CCDC7-201ENST00000277657 ZNF713Q8N859 430 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms