RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 LRWD1Q9UFC0 647 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 ARHGAP6O43182 974 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 COL9A3Q14050 684 aaPredicted RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 TBC1D10BQ4KMP7 808 aaPredicted RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 CCDC122Q5T0U0 273 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 NOC4LQ9BVI4 516 aaKnown RBP16.11■□□□□ 0.17
TMEM47-201ENST00000275954 GBP3Q9H0R5 595 aa16.11■□□□□ 0.17
TMEM47-201ENST00000275954 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 KIF20AO95235 890 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 MMP1P03956 469 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 LIFRP42702 1097 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 BTDP43251 543 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 MECOMQ03112 1051 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 DALRD3Q5D0E6 543 aaKnown RBP16.1■□□□□ 0.17
TMEM47-201ENST00000275954 SV2BQ7L1I2 683 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
TMEM47-201ENST00000275954 KLRK1P26718 216 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 TECP42680 631 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 KIF5AQ12840 1032 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 TXLNBQ8N3L3 684 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 OXER1Q8TDS5 423 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 HOMER2Q9NSB8 354 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 USP17L3A6NCW0 530 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 USP17L4A6NCW7 530 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 MYCP01106 439 aaPredicted RBP16.1■□□□□ 0.17
TMEM47-201ENST00000275954 PLCD1P51178 756 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 HLTFQ14527 1009 aaKnown RBP eCLIP16.1■□□□□ 0.17
TMEM47-201ENST00000275954 USP17L1Q7RTZ2 530 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 CAMTA1Q9Y6Y1 1673 aa16.1■□□□□ 0.17
TMEM47-201ENST00000275954 SSR1P43307 286 aaKnown RBP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 LMAN1P49257 510 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 USH1GQ495M9 461 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 SNX29Q8TEQ0 813 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 PSMB7Q99436 277 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 GSG1L2A8MUP6 293 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 SAMSN1Q9NSI8 373 aaKnown RBP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 CPDO75976 1380 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 SLC1A4P43007 532 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 CCDC144BQ3MJ40 725 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
TMEM47-201ENST00000275954 ZBTB21Q9ULJ3 1066 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 UTYO14607 1347 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 CABP7Q86V35 215 aa16.09■□□□□ 0.17
TMEM47-201ENST00000275954 USP32Q8NFA0 1604 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 XDHP47989 1333 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 CHMP2AO43633 222 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 GRAPQ13588 217 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.17
TMEM47-201ENST00000275954 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.17
TMEM47-201ENST00000275954 CWC15Q9P013 229 aaKnown RBP16.08■□□□□ 0.17
TMEM47-201ENST00000275954 TERF1P54274 439 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 VPS36Q86VN1 386 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 ALS2CR12Q96Q35 445 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 PIM2Q9P1W9 311 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 H0YHG0 523 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 PPP6R2O75170 966 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 CTDNEP1O95476 244 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 PPP2R3AQ06190 1150 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 FMR1NBQ8N0W7 255 aaPredicted RBP16.08■□□□□ 0.16
TMEM47-201ENST00000275954 GOLGA1Q92805 767 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 TSPYL1Q9H0U9 437 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 FOXP1Q9H334 677 aaPredicted RBP16.08■□□□□ 0.16
TMEM47-201ENST00000275954 ATP8A2Q9NTI2 1148 aa16.08■□□□□ 0.16
TMEM47-201ENST00000275954 GOLGA6L10A6NI86 522 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 FOXN1O15353 648 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 KRT86O43790 486 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 GYS1P13807 737 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 TNIP1Q15025 636 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 ERMNQ8TAM6 284 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 USP17L2Q6R6M4 530 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 RNASE9P60153 205 aaKnown RBP16.07■□□□□ 0.16
TMEM47-201ENST00000275954 ETF1P62495 437 aaKnown RBP16.07■□□□□ 0.16
TMEM47-201ENST00000275954 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
TMEM47-201ENST00000275954 FAM207AQ9NSI2 230 aaPredicted RBP16.07■□□□□ 0.16
TMEM47-201ENST00000275954 H7C1D1 291 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 NAA30Q147X3 362 aaPredicted RBP16.06■□□□□ 0.16
TMEM47-201ENST00000275954 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 WDHD1O75717 1129 aaPredicted RBP16.06■□□□□ 0.16
TMEM47-201ENST00000275954 GPSM2P81274 684 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
TMEM47-201ENST00000275954 DCCP43146 1447 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 GDF11O95390 407 aa16.06■□□□□ 0.16
TMEM47-201ENST00000275954 FDPSP14324 419 aaKnown RBP16.06■□□□□ 0.16
TMEM47-201ENST00000275954 DPEP1P16444 411 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms