RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 TBC1D31Q96DN5 1066 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 ZNF274Q96GC6 653 aaPredicted RBP12.67□□□□□ -0.38
USP53-201ENST00000274030 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
USP53-201ENST00000274030 XRCC5P13010 732 aaKnown RBP12.67□□□□□ -0.38
USP53-201ENST00000274030 CYP4A11Q02928 519 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 MORC3Q14149 939 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 NEDD9Q14511 834 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 PPFIBP2Q8ND30 876 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
USP53-201ENST00000274030 MTMR6Q9Y217 621 aa12.67□□□□□ -0.38
USP53-201ENST00000274030 FAM47CQ5HY64 1035 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 VSIG1Q86XK7 387 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 MYOCDQ8IZQ8 938 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 SUGCTQ9HAC7 445 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 MLXIPQ9HAP2 919 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 ATP8A2Q9NTI2 1148 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CIB2O75838 187 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 BTDP43251 543 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 KCNQ4P56696 695 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 KRT71Q3SY84 523 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CAPN12Q6ZSI9 719 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 FANCLQ9NW38 375 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 FAM184BQ9ULE4 1060 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 ABCC4O15439 1325 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 ANKRD42Q8N9B4 389 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 SUPT20HQ8NEM7 779 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CHURC1Q8WUH1 139 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 ARHGEF2Q92974 986 aaKnown RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 CCDC127Q96BQ5 260 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 STAT1P42224 750 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 YARSP54577 528 aaKnown RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 NAA25Q14CX7 972 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 SCYL2Q6P3W7 929 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CCDC89Q8N998 374 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 DLATP10515 647 aaKnown RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 LTKP29376 864 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 PAK2Q13177 524 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
USP53-201ENST00000274030 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 PCDHA7Q9UN72 937 aa12.66□□□□□ -0.38
USP53-201ENST00000274030 KCNK3O14649 394 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 NDUFA8P51970 172 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
USP53-201ENST00000274030 CTAGE3PQ8IX95 158 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 PTPRTO14522 1441 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 H7C1D1 291 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 ANKRD13CQ8N6S4 541 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 OR8K1Q8NGG5 319 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 UHMK1Q8TAS1 419 aaKnown RBP12.65□□□□□ -0.38
USP53-201ENST00000274030 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 SYCE1Q8N0S2 351 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 MYRIPQ8NFW9 859 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 ZSWIM6Q9HCJ5 1215 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 KDRP35968 1356 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
USP53-201ENST00000274030 ARHGEF10O15013 1369 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 PFKFB2O60825 505 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 SCG2P13521 617 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 OAS2P29728 719 aaKnown RBP12.65□□□□□ -0.38
USP53-201ENST00000274030 UBXN2AP68543 259 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 PTGDRQ13258 359 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 TUBB2AQ13885 445 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 TUBB2BQ9BVA1 445 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
USP53-201ENST00000274030 GIPC1O14908 333 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
USP53-201ENST00000274030 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
USP53-201ENST00000274030 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 B4GALNT4Q76KP1 1039 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 OTUD6AQ7L8S5 288 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 CABS1Q96KC9 395 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 AMFRQ9UKV5 643 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 ARHGEF12Q9NZN5 1544 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 K7ENM7 598 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 ABL1P00519 1130 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 SEPT14Q6ZU15 432 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 NEK8Q86SG6 692 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
USP53-201ENST00000274030 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms