RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 MAST1Q9Y2H9 1570 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 PLXNC1O60486 1568 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 F8W031 263 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 GOLGA8MH3BSY2 632 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 TBX3O15119 743 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 SSBP05455 408 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 EIF2S2P20042 333 aaKnown RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 ECE1P42892 770 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 CORO7P57737 925 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 BBS9Q3SYG4 887 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 BICDL1Q6ZP65 573 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 CACTINQ8WUQ7 758 aaKnown RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 ANKRD7Q92527 254 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 DACT3Q96B18 629 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 EHMT1Q9H9B1 1298 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 PALMDQ9NP74 551 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 VPS18Q9P253 973 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 BECN2A8MW95 431 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 FAM25EA8MYX2 175 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 EPN2O95208 641 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 GBP1P32455 592 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 TUBA3EQ6PEY2 450 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 EPB41L4AQ9HCS5 686 aaPredicted RBP9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 AHCYL1O43865 530 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 GFAPP14136 432 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 ACAP1Q15027 740 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 NXNQ6DKJ4 435 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 TBC1D5Q92609 795 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 FAM129AQ9BZQ8 928 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 XPO7Q9UIA9 1087 aaKnown RBP9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 AFG3L2Q9Y4W6 797 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 RAD50Q92878 1312 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 GOLGA8AA7E2F4 631 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 KRT7P08729 469 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 PDE1CQ14123 709 aaPredicted RBP9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 PDIA5Q14554 519 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 IRGCQ6NXR0 463 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 TTC39CQ8N584 583 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 ASIC4Q96FT7 647 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 ABHD8Q96I13 439 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 MTMR9Q96QG7 549 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 ATP6V1DQ9Y5K8 247 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 E9PCH4 1651 aa9.85□□□□□ -0.83
CTDSPL-201ENST00000273179 PLEKHG2Q9H7P9 1386 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 FAM163BP0C2L3 166 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 NFKBIAP25963 317 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 DR1Q01658 176 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 RALGDSQ12967 914 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 RILPL1Q5EBL4 403 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 NBPF15Q8N660 670 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 C8orf48Q96LL4 319 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 NUF2Q9BZD4 464 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 ENDOUP21128 410 aaKnown RBP9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 MARSP56192 900 aaKnown RBP9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 ROR2Q01974 943 aaKnown RBP9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 FAM69CQ0P6D2 419 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 NFIAQ12857 509 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 GRAMD1BQ3KR37 738 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 TMEM57Q8N5G2 664 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 LRRC45Q96CN5 670 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 TMEM87BQ96K49 555 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 CFAP57Q96MR6 1250 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 FNBP1Q96RU3 617 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 EPAS1Q99814 870 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 GBP3Q9H0R5 595 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 PCDH12Q9NPG4 1184 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 KATNA1O75449 491 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 GNAT1P11488 350 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 ALDH3A1P30838 453 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 UBXN2AP68543 259 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 PDE4DQ08499 809 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 STK32CQ86UX6 486 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 EFHD2Q96C19 240 aaPredicted RBP9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 CLIP3Q96DZ5 547 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 SH3GLB2Q9NR46 395 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 EDARQ9UNE0 448 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 STXBP3O00186 592 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 ADCY5O95622 1261 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 SNCBQ16143 134 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 C15orf59Q2T9L4 293 aaPredicted RBP9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 RBM41Q96IZ5 413 aaKnown RBP9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 TMED5Q9Y3A6 229 aa9.84□□□□□ -0.83
CTDSPL-201ENST00000273179 SGSM2O43147 1006 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 SEC24DO94855 1032 aaPredicted RBP9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 ZSCAN22P10073 491 aaPredicted RBP9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 KRT4P19013 534 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 PPP2R1AP30153 589 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 SLC16A2P36021 539 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 NLRP5P59047 1200 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 LRP8Q14114 963 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 CCDC25Q86WR0 208 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 HDAC7Q8WUI4 952 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 SMARCE1Q969G3 411 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 DHX58Q96C10 678 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 RNPC3Q96LT9 517 aaKnown RBP9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 FERD3LQ96RJ6 166 aa9.83□□□□□ -0.84
CTDSPL-201ENST00000273179 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms