RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 PHKBQ93100 1093 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 CCDC51Q96ER9 411 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 PPP1R13BQ96KQ4 1090 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 ARMT1Q9H993 441 aa11.49□□□□□ -0.57
CPNE9-201ENST00000273027 BSDC1Q9NW68 430 aaPredicted RBP11.49□□□□□ -0.57
CPNE9-201ENST00000273027 ARGLU1Q9NWB6 273 aaPredicted RBP11.49□□□□□ -0.57
CPNE9-201ENST00000273027 NIP7Q9Y221 180 aaKnown RBP eCLIP11.49□□□□□ -0.57
CPNE9-201ENST00000273027 ORC4O43929 436 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 SCNN1DP51172 638 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 SPAG1Q07617 926 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 LONRF3Q496Y0 759 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 SLC10A5Q5PT55 438 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 CIAPIN1Q6FI81 312 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 SAPCD2Q86UD0 394 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 ANKRD18AQ8IVF6 992 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 PSMD1Q99460 953 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 NYXQ9GZU5 481 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 ATP8A2Q9NTI2 1148 aa11.48□□□□□ -0.57
CPNE9-201ENST00000273027 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
CPNE9-201ENST00000273027 BTBD18B2RXH4 712 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 BIN1O00499 593 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 MYL1P05976 194 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 SLFN14P0C7P3 912 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 ZNF18P17022 549 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
CPNE9-201ENST00000273027 CYP7A1P22680 504 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 CALML3P27482 149 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 KIF5BP33176 963 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 PLCD1P51178 756 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 SOX10P56693 466 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 CHRNDQ07001 517 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 DMTNQ08495 405 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 TBX2Q13207 712 aaPredicted RBP11.47□□□□□ -0.57
CPNE9-201ENST00000273027 PNOCQ13519 176 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 BMS1Q14692 1282 aaKnown RBP11.47□□□□□ -0.57
CPNE9-201ENST00000273027 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 JAKMIP3Q5VZ66 844 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 SPTY2D1Q68D10 685 aaPredicted RBP11.47□□□□□ -0.57
CPNE9-201ENST00000273027 SPECC1LQ69YQ0 1117 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 GALNT17Q6IS24 598 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 STK11IPQ8N1F8 1099 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 ZNF592Q92610 1267 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
CPNE9-201ENST00000273027 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 ZNF408Q9H9D4 720 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 RMND1Q9NWS8 449 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 DNAI1Q9UI46 699 aa11.47□□□□□ -0.57
CPNE9-201ENST00000273027 TNKSO95271 1327 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 PPP1R2P41236 205 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 GNAQP50148 359 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
CPNE9-201ENST00000273027 TRIM14Q14142 442 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.57
CPNE9-201ENST00000273027 SPATA1Q5VX52 437 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
CPNE9-201ENST00000273027 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 KRT222Q8N1A0 295 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 PANX2Q96RD6 677 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 GLIS2Q9BZE0 524 aaPredicted RBP11.46□□□□□ -0.57
CPNE9-201ENST00000273027 ZMYND15Q9H091 742 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 HSD3B7Q9H2F3 369 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 TOMM22Q9NS69 142 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 MAN1B1Q9UKM7 699 aa11.46□□□□□ -0.57
CPNE9-201ENST00000273027 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.46□□□□□ -0.57
CPNE9-201ENST00000273027 ITIH6Q6UXX5 1313 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 POLR2DO15514 142 aaKnown RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 TUBBP07437 444 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 BCAMP50895 628 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 PDE4BQ07343 736 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 SH3RF1Q7Z6J0 888 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 NIM1KQ8IY84 436 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 AIFM3Q96NN9 605 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 ZIC5Q96T25 663 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 BAG1Q99933 345 aaPredicted RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 CRNKL1Q9BZJ0 848 aaKnown RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 ADARB2Q9NS39 739 aaKnown RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
CPNE9-201ENST00000273027 TRMT1Q9NXH9 659 aaKnown RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 ARPP21Q9UBL0 812 aaPredicted RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 ZNF215Q9UL58 517 aaPredicted RBP11.45□□□□□ -0.58
CPNE9-201ENST00000273027 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
CPNE9-201ENST00000273027 A0A1B0GTH6 734 aa11.44□□□□□ -0.58
CPNE9-201ENST00000273027 USP27XA6NNY8 438 aa11.44□□□□□ -0.58
CPNE9-201ENST00000273027 LAD1O00515 517 aa11.44□□□□□ -0.58
CPNE9-201ENST00000273027 TXLNAP40222 546 aa11.44□□□□□ -0.58
CPNE9-201ENST00000273027 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
CPNE9-201ENST00000273027 NR1I3Q14994 352 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms